DRSC/TRiP Functional Genomics Resources

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Protein Alignment spok and cyp1c1

DIOPT Version :9

Sequence 1:NP_001104460.2 Gene:spok / 5740359 FlyBaseID:FBgn0086917 Length:553 Species:Drosophila melanogaster
Sequence 2:NP_001018446.2 Gene:cyp1c1 / 553637 ZFINID:ZDB-GENE-050522-501 Length:523 Species:Danio rerio


Alignment Length:546 Identity:133/546 - (24%)
Similarity:241/546 - (44%) Gaps:87/546 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 FLLLKCKQKAFVVIGLLYQEKKYQCFDQAPGPHPWPIIGNINLLGRFQYNPFYGFGTLTKKYGDI 87
            |::|...:....|..|.::::       .|||..||::||...||:.   |...|..|.||||::
Zfish    28 FIILFFLEACLWVRNLTFKKR-------LPGPFAWPLVGNAMQLGQM---PHITFSKLAKKYGNV 82

  Fly    88 YSLSLGHTRCIVVNNVDLIKEVLNKNGKYFGGRPDFFRYHKLFGGDRNNSLALCDWSQLQQKRRN 152
            |.:.||.:..:|:|....|::.|.::...|.|||:|..:..:.||   .|....::|:..:..|.
Zfish    83 YQIRLGCSDIVVLNGDAAIRKALVQHSTEFAGRPNFVSFQMISGG---RSSTFTNYSKQWKTHRK 144

  Fly   153 LAR---RHCSPRESSSYFSKMSEIGGLEVNQLLDQLTNISS-GYPCDVKPLILAASANMFCQYMC 213
            :|:   |..|...|.:..:....:.| |...|:.:...:|: |...:.......|:||:.|....
Zfish   145 VAQSTLRAFSMANSQTRKTFEQHVVG-EAMDLVQKFLRLSADGRHFNPAHEATVAAANVVCALCF 208

  Fly   214 SVRFNYSDKGFQKIIEYFDEIFWEINQGYSFDYIPWLVPFYCNHISRIVHWSASIRK----FILE 274
            ..|:.:.|..|:.::...::....:..|...|.:|||..| .|.:..:.....:|.|    ::.:
Zfish   209 GKRYGHDDPEFRTLLGRVNKFGETVGAGSLVDVMPWLQSF-PNPVRSVYQNFKTINKEFFNYVKD 272

  Fly   275 RIVNHRESNININEPD--KDFTDALLKSLKEDK--NVSRNTIIFMLEDFIG-GHSAVGNLVMLAL 334
            :::.||::    .:||  :|.:||::..::..|  .::::.:...:.|.|| |...|...:...|
Zfish   273 KVLQHRDT----YDPDVTRDMSDAIIGVIEHGKESTLTKDFVESTVTDLIGAGQDTVSTAMQWML 333

  Fly   335 AYIAKNPTIALHIRNEVDTVSAKGIRRICLYDMNVMPYTMASISEVLRYSS-SPI-VPHVAMEDT 397
            ..:.|.|:|...::.::|.|..:. |...:.|...:.|..|.|.|.:|::| .|: :||....|.
Zfish   334 LLLVKYPSIQSKLQEQIDKVVGRD-RLPSIEDRCNLAYLDAFIYETMRFTSFVPVTIPHSTTSDV 397

  Fly   398 VIKGFGVRKGTIVFINNYVLNMSESFWNHPEQFDPERFLENNFTNNKESGLKCDDNKRTEFIRKN 462
            .|:|..:.|.|:||||.:.:|.....|:.|..|:|.|||:.|...||:                 
Zfish   398 TIEGLHIPKDTVVFINQWSVNHDPQKWSDPHIFNPSRFLDENGALNKD----------------- 445

  Fly   463 DNDGSTKSKKYGKQNLNNKLLKKSIPQFLPFSVGKRTCIGQSLVRGFGFLLLANIIQNYNVNSAD 527
                           |.|.:        :.||.|||.|||:.:.:...||..|.::.        
Zfish   446 ---------------LTNSV--------MIFSTGKRRCIGEQIAKVEVFLFSAILLH-------- 479

  Fly   528 FSKIKLEKS-SIALPKKC-FKLSLRP 551
              :.|.|:. |..|...| :.|:|:|
Zfish   480 --QCKFERDPSQDLSMDCSYGLALKP 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spokNP_001104460.2 p450 52..549 CDD:299894 127/513 (25%)
cyp1c1NP_001018446.2 p450 50..504 CDD:278495 129/517 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45226
OrthoDB 1 1.010 - - D278622at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.930

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