DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment spok and cyp2d6

DIOPT Version :9

Sequence 1:NP_001104460.2 Gene:spok / 5740359 FlyBaseID:FBgn0086917 Length:553 Species:Drosophila melanogaster
Sequence 2:NP_001015719.1 Gene:cyp2d6 / 548436 XenbaseID:XB-GENE-855872 Length:505 Species:Xenopus tropicalis


Alignment Length:549 Identity:137/549 - (24%)
Similarity:225/549 - (40%) Gaps:111/549 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 FAIAITIILISYVFLLLKCKQKAFVVIGLLYQEKKYQCFDQAPGPHPWPIIGNINLLG-RFQYNP 73
            ||:...:..:..:|.||        ::.|.:.:::..|.|..|.|..||.:||:..:. |..:| 
 Frog    10 FALGCNVFTLGIIFTLL--------LLLLDFMKRRKPCTDFPPSPPSWPFVGNLLQMDFRDLHN- 65

  Fly    74 FYGFGTLTKKYGDIYSLSLGHTRCIVVNNVDLIKEVLNKNGKYFGGRPDFFRYHKLFGGDRNNSL 138
              .|..|:|:|||:.||.:.....:|:|..::|||.|.:..:....||.|..|..|.....|.::
 Frog    66 --SFKQLSKQYGDVMSLRVFWKPTVVLNGFEVIKEALIQKSEDTADRPPFNLYEILGFVGNNKAV 128

  Fly   139 ALCDWSQLQQKRRNLARRHCSPRESSSYFSKMSEIG-GLEVNQLLDQLTNISSGYPCDV------ 196
            .|.::.|..:..|...            .|.:.:.| |   .:.|::.....:||.||.      
 Frog   129 VLANYGQSWKDLRRFT------------LSTLRDFGMG---KKSLEERVRDEAGYLCDAFQSEQG 178

  Fly   197 -----KPLILAASANMFCQYMCSVRFNYSDKGFQKIIEYFDEIFWEINQG---YSFDYIPW--LV 251
                 ..||..|.:|:.|..:...||.|.|..|.|::...:|.. :...|   .....:||  .|
 Frog   179 GPFDPHVLINTAVSNVICSIIFGERFEYDDHKFLKLLCLIEESI-KAESGPVPQIISSLPWSSKV 242

  Fly   252 P-----FYCNHISRIVHWSASIRKFILERIVNHRESNININEPDKDFTDALLKSLKEDKNV---- 307
            |     |:...|..:.:         |:.|:|..:...:... .:||.||.:..:|:.|.|    
 Frog   243 PGLARLFFQPRIHMLQY---------LQEIINEHKQTWDSGH-TRDFIDAFMLEMKKAKGVKDSN 297

  Fly   308 --SRNTIIFMLEDFIGGHSAVGNLVMLALAYIAKNPTIALHIRNEVDTVSAKGIRRICLYDMNVM 370
              .:|.::...:.|..|.......:...|.::...|.:...::.|:|.|..: .|:..:.|:..|
 Frog   298 FNDQNLLLTTADLFSAGSETTTTTLRWGLLFMLLYPDVQRKVQEEIDQVIGR-TRKPTMGDVLQM 361

  Fly   371 PYTMASISEVLRYSS-SPI-VPHVAMEDTVIKGFGVRKGTIVFINNYVLNMSESFWNHPEQFDPE 433
            |||.|.|.|:.||:. .|: |||:|..||.||||.:.|||::..|...:...|..|..|.||.||
 Frog   362 PYTNAVIHEIQRYADIIPLSVPHMAYRDTHIKGFFIPKGTVIMTNLSSVLKDEKVWEKPFQFYPE 426

  Fly   434 RFLENNFTNNKESGLKCDDNKRTEFIRKNDNDGSTKSKKYGKQNLNNKLLKKSIPQFLPFSVGKR 498
            .||                          |.||              |.:|:.  .|:.||.|:|
 Frog   427 HFL--------------------------DRDG--------------KFVKRE--AFMAFSAGRR 449

  Fly   499 TCIGQSLVRGFGFLLLANIIQNYNVNSAD 527
            .|:|:.|.|...||...:::|.::....|
 Frog   450 VCLGEQLARMELFLFFTSLLQRFSFQIPD 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spokNP_001104460.2 p450 52..549 CDD:299894 129/507 (25%)
cyp2d6NP_001015719.1 p450 52..501 CDD:306555 125/499 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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