DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment spok and spo

DIOPT Version :9

Sequence 1:NP_001104460.2 Gene:spok / 5740359 FlyBaseID:FBgn0086917 Length:553 Species:Drosophila melanogaster
Sequence 2:NP_001286943.1 Gene:spo / 38631 FlyBaseID:FBgn0003486 Length:543 Species:Drosophila melanogaster


Alignment Length:558 Identity:324/558 - (58%)
Similarity:414/558 - (74%) Gaps:27/558 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLTSVFYVLFAIAITIILISYVFLLLKCKQKAFVVI----GLLYQEKKYQCFDQAPGPHPWPIIG 61
            ||.::.|.:.||.::::..||:.::...|::....:    ........||.:.|||||.||||||
  Fly     1 MLAALIYTILAILLSVLATSYICIIYGVKRRVLQPVKTKNSTEINHNAYQKYTQAPGPRPWPIIG 65

  Fly    62 NINLLGRFQYNPFYGFGTLTKKYGDIYSLSLGHTRCIVVNNVDLIKEVLNKNGKYFGGRPDFFRY 126
            |::||.|::.:||.||..|.::|||||||:.|||||:||||::||:||||:|||...|||||.||
  Fly    66 NLHLLDRYRDSPFAGFTALAQQYGDIYSLTFGHTRCLVVNNLELIREVLNQNGKVMSGRPDFIRY 130

  Fly   127 HKLFGGDRNNSLALCDWSQLQQKRRNLARRHCSPRESSSYFSKMSEIGGLEVNQLLDQLTN-ISS 190
            ||||||:|:|||||||||||||||||||||||||||.|.::.|||:||..|:.....:|.| :..
  Fly   131 HKLFGGERSNSLALCDWSQLQQKRRNLARRHCSPREFSCFYMKMSQIGCEEMEHWNRELGNQLVP 195

  Fly   191 GYPCDVKPLILAASANMFCQYMCSVRFNYSDKGFQKIIEYFDEIFWEINQGYSFDYIPWLVPFYC 255
            |.|.::|||||.|.||||.|||||:||:|.|..||:|::||||||||||||:..|::|||.|||.
  Fly   196 GEPINIKPLILKACANMFSQYMCSLRFDYDDVDFQQIVQYFDEIFWEINQGHPLDFLPWLYPFYQ 260

  Fly   256 NHISRIVHWSASIRKFILERIVNHRESNININEPDKDFTDALLKSLKEDKNVSRNTIIFMLEDFI 320
            .|:::|::||::||.||:|||:.|||.:::::|||:||||||||||.|||:||||||||||||||
  Fly   261 RHLNKIINWSSTIRGFIMERIIRHRELSVDLDEPDRDFTDALLKSLLEDKDVSRNTIIFMLEDFI 325

  Fly   321 GGHSAVGNLVMLALAYIAKNPTIALHIRNEVDTVSAKGIRRICLYDMNVMPYTMASISEVLRYSS 385
            ||||||||||||.|||||||..|...|:.|:|.:..:..|.|.|.|||.||||||:|.|||||||
  Fly   326 GGHSAVGNLVMLVLAYIAKNVDIGRRIQEEIDAIIEEENRSINLLDMNAMPYTMATIFEVLRYSS 390

  Fly   386 SPIVPHVAMEDTVIKGFGVRKGTIVFINNYVLNMSESFWNHPEQFDPERFLENNFTNNKESGLKC 450
            ||||||||.|||||.|:||.|||||||||||||.||.||.:|::|:|.||||.:           
  Fly   391 SPIVPHVATEDTVISGYGVTKGTIVFINNYVLNTSEKFWVNPKEFNPLRFLEPS----------- 444

  Fly   451 DDNKRTEFIRKNDNDGSTKSKKYGKQNLNNKL-LKKSIPQFLPFSVGKRTCIGQSLVRGFGFLLL 514
                      |..:..::|....|.::.|.|| ||::||.|||||:||||||||:||||||||::
  Fly   445 ----------KEQSPKNSKGSDSGIESDNEKLQLKRNIPHFLPFSIGKRTCIGQNLVRGFGFLVV 499

  Fly   515 ANIIQNYNVNSADFSKIKLEKSSIALPKKCFKLSLRPR 552
            .|::|.||::|.:.|.||:...|:|||..||.|.|.||
  Fly   500 VNVMQRYNISSHNPSTIKISPESLALPADCFPLVLTPR 537

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spokNP_001104460.2 p450 52..549 CDD:299894 309/498 (62%)
spoNP_001286943.1 p450 56..540 CDD:299894 312/503 (62%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45469053
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BIU4
Homologene 1 1.000 - - H107154
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45226
OrthoDB 1 1.010 - - D25968at7147
OrthoFinder 1 1.000 - - FOG0016904
OrthoInspector 1 1.000 - - otm50833
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24303
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
109.860

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