DRSC/TRiP Functional Genomics Resources

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Protein Alignment spok and Cyp18a1

DIOPT Version :9

Sequence 1:NP_001104460.2 Gene:spok / 5740359 FlyBaseID:FBgn0086917 Length:553 Species:Drosophila melanogaster
Sequence 2:NP_523403.2 Gene:Cyp18a1 / 32858 FlyBaseID:FBgn0010383 Length:538 Species:Drosophila melanogaster


Alignment Length:582 Identity:144/582 - (24%)
Similarity:253/582 - (43%) Gaps:115/582 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 LISYVFLLLKCKQKA------FVVIGLL-------YQEKKYQCFDQAPGPHPW--PIIGNINLLG 67
            ||.:|...|:.:|..      .|.:|||       :..:.|:...:.| |.||  |:||.:..:|
  Fly     7 LIKFVLRQLQVQQDGDAQHLLMVFLGLLALVTLLQWLVRNYRELRKLP-PGPWGLPVIGYLLFMG 70

  Fly    68 RFQYNPFYGFGTLTKKYGDIYSLSLGHTRCIVVNNVDLIKEVLNKNGKYFGGRPDFFRYHKLFG- 131
            ..::..|.   .|.|:||.::|..||....:|:::..:|:|...:  :.|.||||......|.| 
  Fly    71 SEKHTRFM---ELAKQYGSLFSTRLGSQLTVVMSDYKMIRECFRR--EEFTGRPDTPFMQTLNGY 130

  Fly   132 GDRNNSLALCDWSQLQQKRRNLARRHCSPRESSSYF-----SKMSEIGGLEVNQLLDQLTNISSG 191
            |..|::..|  |   :.:||.|   |...|:....:     .:|.:....||::.:..| :.|.|
  Fly   131 GIINSTGKL--W---KDQRRFL---HDKLRQFGMTYMGNGKQQMQKRIMTEVHEFIGHL-HASDG 186

  Fly   192 YPCDVKPLILAASANMFCQYMCSVRFNYSDKGFQK---IIEYFDEIFWEINQGYSFDYIPWL--V 251
            .|.|:.|:|..|.:|:.|..|.|.||:..|..|::   :||....:|.||   ::.||||.:  .
  Fly   187 QPVDMSPVISVAVSNVICSLMMSTRFSIDDPKFRRFNFLIEEGMRLFGEI---HTVDYIPTMQCF 248

  Fly   252 PFYCNHISRIVHWSASIRKFILERIVNHRES----NI---------NINEPDKDFTDALLKSLKE 303
            |......::|....|.:::|..:.|.:|:.|    ||         .|.:...:.|||   .|.:
  Fly   249 PSISTAKNKIAQNRAEMQRFYQDVIDDHKRSFDPNNIRDLVDFYLCEIEKAKAEGTDA---ELFD 310

  Fly   304 DKNVSRNTIIFMLEDFIGGHSAVGNLVMLALAYIAKNPTIALHIRNEVDTVSAKGIRRICLYDMN 368
            .||.....:..:::.|..|...:...::....::.:||.....:::|:|.|..:. |...:.|:.
  Fly   311 GKNHEEQLVQVIIDLFSAGMETIKTTLLWINVFMLRNPKEMRRVQDELDQVVGRH-RLPTIEDLQ 374

  Fly   369 VMPYTMASISEVLRYSSSPIVP----HVAMEDTVIKGFGVRKGT--IVFINNYVLNMSESFWNHP 427
            .:|.|.::|.|.:|.||  |||    |....|..:.|:.:..|:  |..||:  ::|..:.|..|
  Fly   375 YLPITESTILESMRRSS--IVPLATTHSPTRDVELNGYTIPAGSHVIPLINS--VHMDPNLWEKP 435

  Fly   428 EQFDPERFLENNFTNNKESGLKCDDNKRTEFIRKNDNDGSTKSKKYGKQNLNNKLLKKSIPQFLP 492
            |:|.|.||:                          |.:|..:..:|                |:|
  Fly   436 EEFRPSRFI--------------------------DTEGKVRKPEY----------------FIP 458

  Fly   493 FSVGKRTCIGQSLVRGFGFLLLANIIQNYNVNSADFSKIKLEKSSI--ALPKKCFKLSLRPR 552
            |.||:|.|:|..|.|...||..|:.:..:::...:...:...|.::  .:..:.||:.|:.|
  Fly   459 FGVGRRMCLGDVLARMELFLFFASFMHCFDIALPEGQPLPSLKGNVGATITPESFKVCLKRR 520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spokNP_001104460.2 p450 52..549 CDD:299894 132/530 (25%)
Cyp18a1NP_523403.2 p450 54..517 CDD:278495 132/530 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45457266
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
32.840

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