DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment spok and cyp2x10.2

DIOPT Version :9

Sequence 1:NP_001104460.2 Gene:spok / 5740359 FlyBaseID:FBgn0086917 Length:553 Species:Drosophila melanogaster
Sequence 2:NP_001315444.1 Gene:cyp2x10.2 / 322545 ZFINID:ZDB-GENE-060818-12 Length:496 Species:Danio rerio


Alignment Length:567 Identity:138/567 - (24%)
Similarity:233/567 - (41%) Gaps:123/567 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 LLLKCKQKAFVVIGLLYQEKKYQCFDQAPGPHPWPIIGNINLLGRFQYNPFYGFGTLTKKYGDIY 88
            |:|.|.....:.:.|..:..|    :..|||.|.||.||:..|.|.  :|...|....:.||.||
Zfish     5 LVLLCLGAFLLYLQLRIRRPK----NFPPGPAPVPIFGNLLQLNRI--SPLKDFDKFAQHYGSIY 63

  Fly    89 SLSLGHTRCIVVNNVDLIKEVLNKNGKYFGGRPDFFRYHKLFGGDRNNSLALCDWSQLQQKRRNL 153
            .:.:|....:|:....:|||.|......|.||.:...:..:.||   ..:.:.|:.:..::.|..
Zfish    64 GIYIGSQPAVVLTGQKMIKEALITQAAEFSGRSNNMMFSHVTGG---KGVIMADYGESWREHRRF 125

  Fly   154 ARRHCSPRESSSYFSKMSEIG----GLEVNQLLDQLTNI------SSGYPCDVKPLILAASANMF 208
            |            .:.:...|    .:| .::|:::.:|      |:|...|.:.|...|::|:.
Zfish   126 A------------LTTLRNFGLGKKSME-QRILEEVKHICLLLEESAGKSIDPQHLYHQAASNII 177

  Fly   209 CQYMCSVRFNYSDKGFQKIIEYFDEIFWEINQGYSFDYIPWLVPFYCNHISRI--------VHWS 265
            ...:...||||.|..||.:|...::: .:|..|      ||.:.:....:.||        ..:.
Zfish   178 ASVIFGSRFNYKDAYFQTLITSVEDL-TKITIG------PWAMLYEIAPVLRIFPLPFQKAFQYF 235

  Fly   266 ASIRKFILERIVNHRESNININEPDKDFTDALLKSL--KEDKNVSRN-----TIIFMLEDFIGGH 323
            ..|.|.:|:.:..|:.|.: ..|| :|..|..|:.:  |.|...|.:     |::|.|  ||.|.
Zfish   236 EQITKHVLKVVEEHKTSRV-AGEP-RDLIDCYLEEMENKSDHRTSFDESQMVTLLFDL--FIAGT 296

  Fly   324 SAVGNLVMLALAYIAKNPTIALHIRNEVDTVSAKGIRRICLY-DMNVMPYTMASISEVLRYSSSP 387
            ....|.:.....|:.....|....:.|:|.|  .|.|....| |.|.|.:..|.|.|..|.:.  
Zfish   297 ETTSNTLRTLTLYLMTYTHIQEQCQREIDEV--LGARDHVTYEDRNAMHFVQAVIHEGQRVAD-- 357

  Fly   388 IVP----HVAMEDTVIKGFGVRKGTIV--FINNYVLNMSESFWNHPEQFDPERFLENNFTNNKES 446
            |.|    |.|..||.::|:.:.||||:  ::::.:  ..|..|..|.:|:|:.||          
Zfish   358 IAPLSMFHSAKTDTQLRGYSIPKGTIIIPYLSSSL--REEGQWKFPHEFNPQNFL---------- 410

  Fly   447 GLKCDDNKRTEFIRKNDNDGSTKSKKYGKQNLNNKLLKKSIPQFLPFSVGKRTCIGQSLVRGFGF 511
                  |::.||: |||                         .|:|||.|.|.|:|::|.|...|
Zfish   411 ------NEKGEFV-KND-------------------------AFMPFSAGPRVCLGENLARMELF 443

  Fly   512 LLLANIIQNY------NVNSADFSKIKLEKSSIALPKKCFKLSLRPR 552
            |:|..:::.:      :....||:.|.....|:    |.:::.:.||
Zfish   444 LILVTVLRRFRLVWPKDAGEPDFTYIYGGTQSV----KPYRVIVEPR 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spokNP_001104460.2 p450 52..549 CDD:299894 131/534 (25%)
cyp2x10.2NP_001315444.1 p450 28..483 CDD:278495 131/535 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45226
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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