DRSC/TRiP Functional Genomics Resources

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Protein Alignment spok and Cyp2j10

DIOPT Version :9

Sequence 1:NP_001104460.2 Gene:spok / 5740359 FlyBaseID:FBgn0086917 Length:553 Species:Drosophila melanogaster
Sequence 2:NP_001128452.2 Gene:Cyp2j10 / 313373 RGDID:1563215 Length:502 Species:Rattus norvegicus


Alignment Length:573 Identity:144/573 - (25%)
Similarity:226/573 - (39%) Gaps:126/573 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 TIILISYVFLLLKCKQKAFVVIGLLYQEKKYQCFDQAPGPHPWPIIGNINLLGRFQYN---PFYG 76
            |::|.:..||.|....|.       .:.|.|     .|||...|.:||:     ||.:   |...
  Rat    20 TLLLAAVTFLFLANYLKT-------RRPKNY-----PPGPWRLPFVGNL-----FQLDVKQPHVV 67

  Fly    77 FGTLTKKYGDIYSLSLGHTRCIVVNNVDLIKEVLNKNGKYFGGRPDFFRYHKLFGGDRNNSLALC 141
            .....||||::.||..|....:|:..:.||||......:.|..||......::|   .||.|.:.
  Rat    68 IQKFVKKYGNLTSLDFGTIPSVVITGLPLIKEAFTNTEQNFLNRPVTPLRKRVF---NNNGLIMS 129

  Fly   142 DWSQLQQKRR---------NLARRHCSPRESSSYFSKMSEIGGLEVNQLLDQLTNISSGYPCDVK 197
            :....:::||         .|.:|....|...            |.|.|::.: ....|.|.|..
  Rat   130 NGQTWKEQRRFTMTTLKNFGLGKRSLEQRIQE------------EANYLVEAI-GADKGQPFDPH 181

  Fly   198 PLILAASANMFCQYMCSVRFNYSDKGFQKIIEYFDE--------------IFWEINQGYSFDYIP 248
            ..|.:|.:|:.|......||.|.|..||:::...||              :|..|     ..|:|
  Rat   182 FKINSAVSNIICSITFGERFEYEDSLFQELLRLLDEASCLESSMMCQLYNVFPTI-----IKYLP 241

  Fly   249 WLVPFYCNHISRIVHWSASIRKFILERIVNHRESNININEPDKDFTDALLKSLKE--DKNVS--- 308
            .      :|.:.:.:|..  .|..:..:::..:.:.|.:|| :||.||.|..:.:  ||..:   
  Rat   242 G------SHQTVLRNWEK--LKLFISCMMDSHQKDWNPDEP-RDFIDAFLTEMAKYRDKTTTSFN 297

  Fly   309 -RNTIIFMLEDFIGGHSAVGNLVMLALAYIAKNPTIALHIRNEVDTVSAKGIRRICLYDMNVMPY 372
             .|.|...|:.|..|.....|::..:|.||..||.:...:.:|:|.|.... |:....|.:.|||
  Rat   298 KENLIYSTLDLFFAGSETTSNILRWSLLYITTNPEVQEKVHSEIDRVIGHR-RQPSTGDRDAMPY 361

  Fly   373 TMASISEVLRYSS-SPI-VPHVAMEDTVIKGFGVRKGTIVFINNYVLNMSESFWNHPEQFDPERF 435
            |.|.|.||||..: .|: ||.....|:.:.||.:.|||.:..|...|:.....|..|:.|:||.|
  Rat   362 TNAVIHEVLRMGNIIPLNVPREMTADSTLAGFHLPKGTTILTNLTGLHRDPKEWATPDTFNPEHF 426

  Fly   436 LENNFTNNKESGLKCDDNKRTEFIRKNDNDGSTKSKKYGKQNLNNKLLKKSIPQFLPFSVGKRTC 500
            |||.                 :| :|.|:                         |||||:|||.|
  Rat   427 LENG-----------------QF-KKRDS-------------------------FLPFSMGKRAC 448

  Fly   501 IGQSLVRGFGFLLLANIIQNYNVNSADFSKIKLE-KSSIALPKKCFKLSLRPR 552
            .|:.|.|...|:....::||:.........:.|: ::.:.|.....::...||
  Rat   449 PGEQLARTELFIFFTALMQNFTFKPPVNETLSLKFRNGLTLAPVSHRICAVPR 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spokNP_001104460.2 p450 52..549 CDD:299894 134/531 (25%)
Cyp2j10NP_001128452.2 cytochrome_P450 75..496 CDD:425388 123/494 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45226
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X6
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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