DRSC/TRiP Functional Genomics Resources

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Protein Alignment spok and Cyp2b21

DIOPT Version :10

Sequence 1:NP_001104460.2 Gene:spok / 5740359 FlyBaseID:FBgn0086917 Length:553 Species:Drosophila melanogaster
Sequence 2:NP_942028.1 Gene:Cyp2b21 / 292728 RGDID:735174 Length:494 Species:Rattus norvegicus


Alignment Length:546 Identity:141/546 - (25%)
Similarity:231/546 - (42%) Gaps:119/546 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VLFAIAITIILISYVFLLLKCKQKAFVVIGLLYQEKKYQCFDQAPGPHPWPIIGNINLLGRFQYN 72
            :|||     :|..::.||::.:...:   |.|           .|||.|.|::||:..:.|  ..
  Rat     7 LLFA-----LLTGFLLLLIRGQGNGY---GHL-----------PPGPCPLPLLGNVLQMDR--RG 50

  Fly    73 PFYGFGTLTKKYGDIYSLSLGHTRCIVVNNVDLIKEVLNKNGKYFGGR-------PDFFRYHKLF 130
            ....|..|..||||:.::.||....:::...:.|:|.|..:.:.|.||       |....|..:|
  Rat    51 LLKSFIQLRDKYGDVVTVHLGPRPIVMLYGTETIREALVDHAEAFSGRGTVAVVQPIIQDYGMIF 115

  Fly   131 -GGDRNNSLALCDWSQLQQKRRNLARRHCSPRESSSYFSKMSEIGGLEVNQLLDQLTNISSGYPC 194
             .|:|        |..|  :|.:||..........|...::.|    |...|:::|... .|.|.
  Rat   116 ANGER--------WKIL--RRFSLATMRDFGMGKRSVEERIKE----EAQCLVEELKKY-KGAPL 165

  Fly   195 DVKPLILAASANMFCQYMCSVRFNYSDKGFQKIIEYFDEIF----------WEINQGYSFDYIPW 249
            |....:...:||:.|..:...||:|:|..|..:::.|.||.          :|:..|: ..|.|.
  Rat   166 DPTFHLQCITANIICSIVFGERFDYTDHQFLHLLDLFYEILSLVSSFSSQVFELFTGF-LKYFPG 229

  Fly   250 LVPFYCNHISRIVHWSASIRKFILERIVNHRESNININEPDKDFTDA-LLKSLKEDKN-----VS 308
            .    ..|||:.:.   .|..||...:..|| :.::.:.| :||.|. ||:..||..|     ..
  Rat   230 T----HRHISKNIE---EILNFIGHCVEKHR-ATLDPSTP-RDFIDTYLLRMEKEKLNHHTEFHH 285

  Fly   309 RNTIIFMLEDFIGGHSAVGNLVMLALAYIAKNPTIALHIRNEVDTVSAKGIRRICLYDMNV-MPY 372
            :|.::.:|..|..|.......:......:.|.|.:|..::.|:|.|.  |..|:...|..: |||
  Rat   286 QNLMMSVLSLFFAGTETSSTTLRYGFLLMLKYPHVAEKVQKEIDQVI--GSHRVPTLDDRIKMPY 348

  Fly   373 TMASISEVLRYSS-SPI-VPHVAMEDTVIKGFGVRKGTIVF-INNYVLNMSESFWNHPEQFDPER 434
            |.|.|.|:.|:|. .|| :||...:||:.:|:.:.|...|: |.:..|: ...::.||:.|:||.
  Rat   349 TDAVIHEIQRFSDLVPIGLPHRVTKDTLFRGYLLPKNIEVYPILSSALH-DPQYFEHPDTFNPEH 412

  Fly   435 FLENNFTNNKESGLKCDDNKRTEFIRKNDNDGSTKSKKYGKQNLNNKLLKKSIPQFLPFSVGKRT 499
            ||:.|..                 ::||:                         .|||||.|||.
  Rat   413 FLDANGA-----------------LKKNE-------------------------AFLPFSTGKRV 435

  Fly   500 CIGQSLVRGFGFLLLANIIQNYNVNS 525
            |:|:.:.|...||....|:||::|:|
  Rat   436 CLGEGIARNELFLFFTTILQNFSVSS 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spokNP_001104460.2 CYP1_2-like 85..547 CDD:410710 121/469 (26%)
Cyp2b21NP_942028.1 CYP2B 62..486 CDD:410765 122/470 (26%)

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