DRSC/TRiP Functional Genomics Resources

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Protein Alignment spok and Cyp2b3

DIOPT Version :9

Sequence 1:NP_001104460.2 Gene:spok / 5740359 FlyBaseID:FBgn0086917 Length:553 Species:Drosophila melanogaster
Sequence 2:NP_775416.1 Gene:Cyp2b3 / 286953 RGDID:628627 Length:491 Species:Rattus norvegicus


Alignment Length:587 Identity:142/587 - (24%)
Similarity:251/587 - (42%) Gaps:141/587 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLTSVFYVLFAIAITIILISYVFLLLKCKQKAFVVIGLLYQEKKYQCFDQAPGPHPWPIIGNINL 65
            |.|||..:|      .:|:|::..|::...|   |.|.|           .|||.|.|::||:..
  Rat     1 MDTSVLLLL------AVLLSFLLFLVRGHAK---VHGHL-----------PPGPRPLPLLGNLLQ 45

  Fly    66 LGRFQYNPFYGFGTLTKKYGDIYSLSLGHTRCIVVNNVDLIKEVLNKNGKYFGGR-------PDF 123
            :.|..:..  .|..|.:|:||::::..|....:::.....|:|.|..:.:.|.||       |..
  Rat    46 MDRGGFRK--SFIQLQEKHGDVFTVYFGPRPVVMLCGTQTIREALVDHAEAFSGRGIIAVLQPIM 108

  Fly   124 FRYHKLFGGDRNNSLALCDWSQLQQKRRNLARRHCSPRESSSYFSKMSEIG----------GLEV 178
            ..|...|               :.::|..:.||        .:.:.|.:.|          ..|.
  Rat   109 QEYGVSF---------------VNEERWKILRR--------LFVATMRDFGIGKQSVEDQIKEEA 150

  Fly   179 NQLLDQLTNISSGYPCDVKPLILAASANMFCQYMCSVRFNYSDKGFQKIIEYFDEIFWEIN---- 239
            ..|:::|.| ..|...|...|....:.|:.|..:...||:|.|:.|.::::.....|..|:    
  Rat   151 KCLVEELKN-HQGVSLDPTFLFQCVTGNIICSIVFGERFDYRDRQFLRLLDLLYRTFSLISSFSS 214

  Fly   240 ---QGYSFDYIPWLVPFYCNHISRIVHWS-ASIRKFILERIVNHRESNININEPDKDFTDALLKS 300
               :.|| |::.     |...:.|.::.: ..:..:|...:.||| :.::.|.| :||.|..|..
  Rat   215 QMFEVYS-DFLK-----YFPGVHREIYKNLKEVLDYIDHSVENHR-ATLDPNAP-RDFIDTFLLH 271

  Fly   301 LKEDK--NVSR----NTIIFMLEDFIGGHSAVGNLVMLALAYIAKNPTIALHIRNEVDTVSAKGI 359
            ::::|  :.:.    |.:|.:|..|:.|..:..|.:......:.|.|.:|..::.|:|.|.  |.
  Rat   272 MEKEKLNHYTEFHHWNLMISVLFLFLAGTESTSNTLCYGFLLMLKYPHVAEKVQKEIDQVI--GS 334

  Fly   360 RRI-CLYDMNVMPYTMASISEVLRYSS-SPI-VPHVAMEDTVIKGFGVRKGT-IVFINNYVLNMS 420
            :|: .|.|.:.||||.|.|.|:.|:|. ||: :|....:||:.:|:.:.|.| :.||.:..|: .
  Rat   335 QRVPTLDDRSKMPYTEAVIHEIQRFSDVSPMGLPCRITKDTLFRGYLLPKNTEVYFILSSALH-D 398

  Fly   421 ESFWNHPEQFDPERFLENNFTNNKESGLKCDDNKRTEFIRKNDNDGSTKSKKYGKQNLNNKLLKK 485
            ..::..|:.|:||.||:.|....     ||:                                  
  Rat   399 PQYFEQPDTFNPEHFLDANGALK-----KCE---------------------------------- 424

  Fly   486 SIPQFLPFSVGKRTCIGQSLVRGFGFLLLANIIQNYNVNS-ADFSKIKL--EKSSIA----LPKK 543
               .|:|||:|||.|:|:.:.|...||....|:|||:|:| .|.:.|.:  ::|.:|    :.|.
  Rat   425 ---AFMPFSIGKRMCLGEGIARSELFLFFTTILQNYSVSSPVDPNTIDMTPKESGLAKVAPVYKI 486

  Fly   544 CF 545
            ||
  Rat   487 CF 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spokNP_001104460.2 p450 52..549 CDD:299894 130/536 (24%)
Cyp2b3NP_775416.1 p450 42..488 CDD:278495 122/524 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45226
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.010

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