DRSC/TRiP Functional Genomics Resources

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Protein Alignment spok and Cyp2a2

DIOPT Version :9

Sequence 1:NP_001104460.2 Gene:spok / 5740359 FlyBaseID:FBgn0086917 Length:553 Species:Drosophila melanogaster
Sequence 2:NP_036825.1 Gene:Cyp2a2 / 24895 RGDID:2464 Length:492 Species:Rattus norvegicus


Alignment Length:547 Identity:137/547 - (25%)
Similarity:240/547 - (43%) Gaps:109/547 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 IAITIIL--ISYVFLLLKCKQKAFVVIGLLYQEKKYQCFDQAPGPHPWPIIGNINLLGRFQYNPF 74
            :.:.:||  :|.:||:...:||        .:|:      ..|||.|.|.|||...|.  ..:.:
  Rat     6 LLLVVILASLSVMFLVSLWQQK--------IRER------LPPGPTPLPFIGNYLQLN--MKDVY 54

  Fly    75 YGFGTLTKKYGDIYSLSLGHTRCIVVNNVDLIKEVLNKNGKYFGGRPDFFRYHKLFGGDRNNSLA 139
            .....|:::||.::::.||..|.:|:...|.:||.|....:.|.||.:...::.||.|   ...:
  Rat    55 SSITQLSERYGPVFTIHLGPRRIVVLYGYDAVKEALVDQAEEFSGRGELPTFNILFKG---YGFS 116

  Fly   140 LCDWSQLQQKRR---------NLARRHCSP--RESSSYFSKMSEIGGLEVNQLLDQLTNISSGYP 193
            |.:..|.::.||         .:.:|....  .|.:.|..|  .:.|             :.|.|
  Rat   117 LSNVEQAKRIRRFTIATLRDFGVGKRDVQECILEEAGYLIK--TLQG-------------TCGAP 166

  Fly   194 CDVKPLILAASANMFCQYMCSVRFNYSDKGFQKIIEYFDE--IFWEINQGYSFDYIPWLVPFYCN 256
            .|....:....:|:....:...||:|.||.|..::|..||  ||.....|..:|....::.:...
  Rat   167 IDPSIYLSKTVSNVINSIVFGNRFDYEDKEFLSLLEMIDEMNIFAASATGQLYDMFHSVMKYLPG 231

  Fly   257 HISRIVHWSASIRKFILERI-VNHRESNININEPDKDFTDALLKSLKEDKNVS-----RNTIIFM 315
            ...:|:..:..:..|::|:: .||  |.::.|.| ::|.|:.|..::|:|.|:     .|.::..
  Rat   232 PQQQIIKVTQKLEDFMIEKVRQNH--STLDPNSP-RNFIDSFLIRMQEEKYVNSEFHMNNLVMSS 293

  Fly   316 LEDFIGGHSAVGNLVMLALAYIAKNPTIALHIRNEVDTVSAKGIRRICLYDMNVMPYTMASISEV 380
            |.....|..:|.:.:......:.|:|.:...:..|::.|..:. |:....|...||||.|.|:|:
  Rat   294 LGLLFAGTGSVSSTLYHGFLLLMKHPDVEAKVHEEIERVIGRN-RQPQYEDHMKMPYTQAVINEI 357

  Fly   381 LRYSS-SPI-VPHVAMEDTVIKGFGVRKGTIVF-INNYVLNMSESFWNHPEQFDPERFLENNFTN 442
            .|:|: :|: :|...:::|..:||.:.|||.|| |...::...:.|.|| :.|:|:.||      
  Rat   358 QRFSNLAPLGIPRRIIKNTTFRGFFLPKGTDVFPIIGSLMTEPKFFPNH-KDFNPQHFL------ 415

  Fly   443 NKESGLKCDDNKRTEFIRKNDNDGSTKSKKYGKQNLNNKLLKKSIPQFLPFSVGKRTCIGQSLVR 507
                                |:.|.               |||: ..|||||:|||.|:|.||.:
  Rat   416 --------------------DDKGQ---------------LKKN-AAFLPFSIGKRFCLGDSLAK 444

  Fly   508 GFGFLLLANIIQNYN----VNSADFSK 530
            ...||||..|:||:.    :|..|.::
  Rat   445 MELFLLLTTILQNFRFKFPMNLEDINE 471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spokNP_001104460.2 p450 52..549 CDD:299894 129/505 (26%)
Cyp2a2NP_036825.1 p450 33..489 CDD:278495 129/506 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45226
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X6
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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