DRSC/TRiP Functional Genomics Resources

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Protein Alignment spok and Cyp2d3

DIOPT Version :9

Sequence 1:NP_001104460.2 Gene:spok / 5740359 FlyBaseID:FBgn0086917 Length:553 Species:Drosophila melanogaster
Sequence 2:NP_775116.1 Gene:Cyp2d3 / 24303 RGDID:2472 Length:500 Species:Rattus norvegicus


Alignment Length:525 Identity:120/525 - (22%)
Similarity:226/525 - (43%) Gaps:90/525 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 LISYVFLLLKCKQKAFVVIGLLYQEKKYQCFDQAPGPHPWPIIGNINLLGRFQYNPFYGFGTLTK 82
            :.:.:|:||         :.|:::.:::.. ...|||.|||::|  |||.....|..|....|..
  Rat    14 IFTVIFILL---------VDLMHRRQRWTS-RYPPGPVPWPVLG--NLLQVDLCNMPYSMYKLQN 66

  Fly    83 KYGDIYSLSLGHTRCIVVNNVDLIKEVLNKNGKYFGGRPDFFRYHKLFGGDRNNSLALC----DW 143
            :|||::||.:|....:|:|.:..::|:|...|:....||:...:..:..|.:...:.|.    :|
  Rat    67 RYGDVFSLQMGWKPVVVINGLKAVQELLVTCGEDTADRPEMPIFQHIGYGHKAKGVVLAPYGPEW 131

  Fly   144 SQLQQKRRNLARRHCSPRESSSYFSKMSEIGGLEVNQLLDQLTNISSGYPCDVKPLILAASANMF 208
            .  :|:|.:::..........|....:::    |.:.|.|.|| ..:|.|.|...|:..|..|:.
  Rat   132 R--EQRRFSVSTLRNFGVGKKSLEQWVTD----EASHLCDALT-AEAGRPLDPYTLLNKAVCNVI 189

  Fly   209 CQYMCSVRFNYSDKGFQKIIEYFDEIFWEINQGYSFDYIPWLVPFYCNHISRIVHWSASI----R 269
            ...:.:.||:|.|..|.|:::...|...|  |...|..:..:.|.    :.||...:..:    :
  Rat   190 ASLIYARRFDYGDPDFIKVLKILKESMGE--QTGLFPEVLNMFPV----LLRIPGLADKVFPGQK 248

  Fly   270 KFI--LERIVNHRESNININEPDKDFTDALLKSLKEDKNVSRNT-----IIFMLEDFIGGHSAVG 327
            .|:  ::.:|...:...:.::|.:|.|||.|..:::.|....::     :..::.|..|......
  Rat   249 TFLTMVDNLVTEHKKTWDPDQPPRDLTDAFLAEIEKAKGNPESSFNDANLRLVVNDLFGAGMVTT 313

  Fly   328 NLVML-ALAYIAKNPTIALHIRNEVDTVSAKGIRRICLYDMNVMPYTMASISEVLRYSS-SPI-V 389
            ::.:. ||..:..:|.:...::.|:|.|..: :|...:.|...||:|.|.|.||.|::. .|: :
  Rat   314 SITLTWALLLMILHPDVQCRVQQEIDEVIGQ-VRHPEMADQAHMPFTNAVIHEVQRFADIVPMNL 377

  Fly   390 PHVAMEDTVIKGFGVRKGTIVFINNYVLNMSESFWNHPEQFDPERFL--ENNFTNNKESGLKCDD 452
            ||....|..::||.:.|||.:..|...:...|:.|..|.:|.||.||  :.||..::        
  Rat   378 PHKTSRDIEVQGFLIPKGTTLIPNLSSVLKDETVWEKPLRFHPEHFLDAQGNFVKHE-------- 434

  Fly   453 NKRTEFIRKNDNDGSTKSKKYGKQNLNNKLLKKSIPQFLPFSVGKRTCIGQSLVRGFGFLLLANI 517
                                                .|:|||.|:|.|:|:.|.|...||....:
  Rat   435 ------------------------------------AFMPFSAGRRACLGEPLARMELFLFFTCL 463

  Fly   518 IQNYN 522
            :|.::
  Rat   464 LQRFS 468

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spokNP_001104460.2 p450 52..549 CDD:299894 116/491 (24%)
Cyp2d3NP_775116.1 p450 37..496 CDD:278495 116/492 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45226
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X6
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.920

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