DRSC/TRiP Functional Genomics Resources

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Protein Alignment spok and Cyp2c23

DIOPT Version :9

Sequence 1:NP_001104460.2 Gene:spok / 5740359 FlyBaseID:FBgn0086917 Length:553 Species:Drosophila melanogaster
Sequence 2:XP_017173651.1 Gene:Cyp2c23 / 226143 MGIID:1888897 Length:501 Species:Mus musculus


Alignment Length:537 Identity:134/537 - (24%)
Similarity:223/537 - (41%) Gaps:106/537 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 PGPHPWPIIGNINLLGRFQYNPFYGFGTLTKKYGDIYSLSLGHTRCIVVNNVDLIKEVLNKNGKY 116
            |||.|.||||||..|.......  ....|.|:||.:|:|..|....:|::..|::||.|...|..
Mouse    35 PGPTPLPIIGNILQLDLKDIPA--SLSKLAKEYGPVYTLYFGSWPTVVLHGYDVVKEALLNQGDE 97

  Fly   117 FGGR------PDFFRYHKLFGGDRNNSLALCDWSQLQQKRRNLARRHCSPRESSSYFSKMSEIGG 175
            |.||      .|..:.|.:...:......|..:|.:..|...:.:|....|...           
Mouse    98 FLGRGPLPIIEDSQKGHGIVFSEGERWKLLRRFSLMTLKNFGMGKRSLEERVQE----------- 151

  Fly   176 LEVNQLLDQLTNISSGYPCDVKPLILAASANMFCQYMCSVRFNYSDKGFQKIIEYFDEIFWEINQ 240
             |...|:::| :.:...|.|...::..|..|:.|..:.:.||.|:||.|..:::..::.|:::|.
Mouse   152 -EARCLVEEL-HKTEAQPFDPTFILACAPCNVICSILFNERFPYNDKTFLNLMDLLNKNFYQLNS 214

  Fly   241 GYSFDYIPW-----LVPFYCNHISRIVHWSASIRKFILERIVNHRESNININEPDKDFTDALLKS 300
            .:...|..|     .:|......|:.:   ..::.||||::..|:||....|  .:|:.|..|..
Mouse   215 IWIQMYNLWPTIMKYIPGKHREFSKRL---GGVKNFILEKVKEHQESLDPAN--PRDYIDCFLSK 274

  Fly   301 LKEDKNVSRNTIIFMLED--------FIGGHSAVGNLVMLALAYIAKNPTI-------ALHIRNE 350
            ::|:|:..::.  |.||:        |..|.......:...|..:.|:|.:       ...:..|
Mouse   275 IEEEKHNLKSD--FNLENLAICGSNLFTAGTETTSTTLRFGLLLLVKHPEVQGTPSEEGAKVHEE 337

  Fly   351 VDTVSAKGIRRICLYDMNVMPYTMASISEVLRY----SSSPIVPHVAMEDTVIKGFGVRKGTIV- 410
            :|.|..:. :...:.|...:|||.|.:.|:.||    .||  :||..::||..:.:.:.|||.| 
Mouse   338 LDRVIGRH-QPPSMKDKMKLPYTDAVLHEIQRYITLLPSS--LPHAVVQDTKFRHYVIPKGTAVF 399

  Fly   411 -FINNYVLNMSESFWNHPEQFDPERFLENNFTNNKESGLKCDDNKRTEFIRKNDNDGSTKSKKYG 474
             |:::.:|:..|  :.:||:|||..||:.|                          |..|...| 
Mouse   400 PFLSSILLDQKE--FPNPEKFDPGHFLDKN--------------------------GCFKKTDY- 435

  Fly   475 KQNLNNKLLKKSIPQFLPFSVGKRTCIGQSLVRGFGFLLLANIIQNYN----VNSADFSKIKLEK 535
                           |:|||:|||:|:|:.|.|...||....|:|.::    |...|.....:..
Mouse   436 ---------------FVPFSLGKRSCVGEGLARMELFLFFTTILQKFSLKALVEPKDLDIKPVTT 485

  Fly   536 SSIALPKKCFKLSLRPR 552
            ....||.. :||.|.||
Mouse   486 GLFNLPPP-YKLRLVPR 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spokNP_001104460.2 p450 52..549 CDD:299894 131/532 (25%)
Cyp2c23XP_017173651.1 p450 34..496 CDD:365848 129/530 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45226
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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