DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment spok and cyp-33B1

DIOPT Version :9

Sequence 1:NP_001104460.2 Gene:spok / 5740359 FlyBaseID:FBgn0086917 Length:553 Species:Drosophila melanogaster
Sequence 2:NP_505342.2 Gene:cyp-33B1 / 182888 WormBaseID:WBGene00016092 Length:496 Species:Caenorhabditis elegans


Alignment Length:541 Identity:135/541 - (24%)
Similarity:219/541 - (40%) Gaps:124/541 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 PGPHPWPIIGNINLLGRFQYNPFYGFGTLTKKYGDIYSLSLGHTRCIVVNNVDLIKEVLNKNGKY 116
            |||.|.||.||:..|...:......|.....:||.|::..:|....:|:.:...|||.:.|:|..
 Worm    27 PGPTPIPIFGNLFQLSGSEAPGISIFQKWKDQYGPIFTFYMGPVPFVVLTDYQDIKETVIKDGDT 91

  Fly   117 FGGR---PDFFRYHK--LFG-----GDRNNSLALCDWSQ------LQQKRRNLARRHCSPRESSS 165
            :..:   |:|.:|.:  .:|     |||        |.:      ||.:...:.:    |...|.
 Worm    92 YADKYLSPEFNKYFRGGEYGIMDISGDR--------WKEHRKFAVLQLRELGVGK----PLMESK 144

  Fly   166 YFSKMSE-IGGLEVNQLLDQLTNISSGYPCDVKPLILAASANMFCQYMCSVRFNYSDK-GFQKII 228
            ...:..| |..|:..::|::...:.|  ..||      |..::..|::...||:.|.. .|.:|.
 Worm   145 ILIEAEELIKKLKTAEILNEDFLLQS--ELDV------AVGSVINQFLFGYRFDRSKLFEFTRIK 201

  Fly   229 EYFDEIFWEINQGYSFDYIPWLVPFYCNHI---------SRIVHWSASIRKFILERIVNHRESNI 284
            ...:....|:.:...      ::.|.|:.|         |.|......:.:| |.:.::..:|.|
 Worm   202 TLVNNFMEEVGKPLG------VLAFTCHGIPSFLVKLMVSGIEEQKRELFRF-LRKQIDGAKSQI 259

  Fly   285 NINEP-DKDFTDALL--KSLKEDKNVSRNTIIFMLED-----FIGGHSAVGNLVMLALAYIAKNP 341
            |..|. ::||.:|.|  |..:|.||...:.....||:     :..|...:.|.|...:||....|
 Worm   260 NYEEEHNEDFVEAYLRKKFQREQKNDFDSYCDSQLENVCFDIWAAGFDTLTNTVGFLIAYAINYP 324

  Fly   342 TIALHIRNEVDTVSAKGIRRICLYDMNVMPYTMASISEVLRYSS-SPI-VPHVAMEDTVIKGFGV 404
            .:.:.|..|:|...|...|.:.|.|.|.:.|..|..:|..|.|: .|: :||....|..:||:.:
 Worm   325 EMQMLIHQEIDNYLAHHSRLLTLADKNALVYFNAFANEAQRVSNILPMNLPHALTRDVKLKGYHL 389

  Fly   405 RKGTIVFINNYVLNM--SESFWNHPEQFDPERFLENNFTNNKESGLKCDDNKRTEFIRKNDNDGS 467
            :|||.|.  :.:.|:  .|:.:...::|||.||::.|                            
 Worm   390 KKGTGVI--HQIANVMTDETIFKDSQRFDPNRFIDEN---------------------------- 424

  Fly   468 TKSKKYGKQNLNNKLLKKSIPQFLPFSVGKRTCIGQSLVRGFGFLLLANIIQNYNVNSA------ 526
                  ||       ||| |.:..|||:|||.|||:.|.|...|||.||:...:....|      
 Worm   425 ------GK-------LKK-IEELCPFSMGKRQCIGEGLARMEIFLLAANLFNYFEFLPASDGLPS 475

  Fly   527 ---DFSKIKLEKSSIALPKKC 544
               |||.:     |..:|.||
 Worm   476 LYKDFSLV-----SHVIPYKC 491

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spokNP_001104460.2 p450 52..549 CDD:299894 135/541 (25%)
cyp-33B1NP_505342.2 p450 26..490 CDD:278495 133/538 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166566
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45226
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.940

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