DRSC/TRiP Functional Genomics Resources

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Protein Alignment spok and Cyp2d4

DIOPT Version :9

Sequence 1:NP_001104460.2 Gene:spok / 5740359 FlyBaseID:FBgn0086917 Length:553 Species:Drosophila melanogaster
Sequence 2:NP_612524.1 Gene:Cyp2d4 / 171522 RGDID:620640 Length:500 Species:Rattus norvegicus


Alignment Length:543 Identity:129/543 - (23%)
Similarity:223/543 - (41%) Gaps:112/543 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LFAIAITIILISYVFLLLKCKQKAFVVIGLLYQEKKYQCFDQAPGPHPWPIIGNINLLGRFQYNP 73
            |:.|||..|    :||||         :.|:::.:::.. ...|||.|||::||: |...||..|
  Rat     9 LWPIAIFTI----IFLLL---------VDLMHRRQRWTS-RYPPGPVPWPVLGNL-LQIDFQNMP 58

  Fly    74 FYGFGTLTKKYGDIYSLSLGHTRCIVVNNVDLIKEVLNKNGKYFGGRPDFFRYHKLFGGDRNNSL 138
             .||..|..::||::||.|.....:|:|.:..::|.|.|..:....||......:...|.|:..:
  Rat    59 -AGFQKLRCRFGDLFSLQLAFESVVVLNGLPALREALVKYSEDTADRPPLHFNDQSGFGPRSQGV 122

  Fly   139 ALCDWSQLQQKRRNLARRHCSPRESSSYFSKMSEIGGLEVNQLLDQLTNIS----------SGYP 193
            .|..:....:::|         |.|.|.|...    ||....|...:|..:          ||:|
  Rat   123 VLARYGPAWRQQR---------RFSVSTFRHF----GLGKKSLEQWVTEEARCLCAAFADHSGFP 174

  Fly   194 CDVKPLILAASANMFCQYMCSVRFNYSDKGFQKIIEYFDEIFWEINQGYSFDYIPWLVPFYCNHI 258
            .....|:..|..|:....:.:.||.|:|..|.::::...:.. |...|:        :|...|..
  Rat   175 FSPNTLLDKAVCNVIASLLFACRFEYNDPRFIRLLDLLKDTL-EEESGF--------LPMLLNVF 230

  Fly   259 SRIVHWSASIRKF---------ILERIVNHRESNININEPDKDFTDALLKSLKEDKN------VS 308
            ..::|....:.|.         :|:.::...:...:..:|.:|.|||.|..:::.|.      ..
  Rat   231 PMLLHIPGLLGKVFSGKKAFVAMLDELLTEHKVTWDPAQPPRDLTDAFLAEVEKAKGNPESSFND 295

  Fly   309 RNTIIFMLEDFIGGHSAVGNLVMLALAYIAKNPTIALHIRNEVDTVSAKGIRRICLYDMNVMPYT 373
            .|..:.:.:.|:.|.......:..||.::...|.:...::.|:|.|..: :||..:.|...||:|
  Rat   296 ENLRVVVADLFMAGMVTTSTTLTWALLFMILRPDVQCRVQQEIDEVIGQ-VRRPEMADQARMPFT 359

  Fly   374 MASISEVLRYSS-SPI-VPHVAMEDTVIKGFGVRKGTIVFINNYVLNMSESFWNHPEQFDPERFL 436
            .|.|.||.|::. .|: |||....|..::||.:.|||.:.||...:...|:.|..|.:|.||.||
  Rat   360 NAVIHEVQRFADILPLGVPHKTSRDIEVQGFLIPKGTTLIINLSSVLKDETVWEKPLRFHPEHFL 424

  Fly   437 --ENNFTNNKESGLKCDDNKRTEFIRKNDNDGSTKSKKYGKQNLNNKLLKKSIPQFLPFSVGKRT 499
              :.||..::                                            .|:|||.|:|.
  Rat   425 DAQGNFVKHE--------------------------------------------AFMPFSAGRRA 445

  Fly   500 CIGQSLVRGFGFLLLANIIQNYN 522
            |:|:.|.|...||....::|.::
  Rat   446 CLGEPLARMELFLFFTCLLQRFS 468

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spokNP_001104460.2 p450 52..549 CDD:299894 119/500 (24%)
Cyp2d4NP_612524.1 p450 37..496 CDD:278495 119/501 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45226
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X6
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.920

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