DRSC/TRiP Functional Genomics Resources

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Protein Alignment spok and Cyp2t1

DIOPT Version :10

Sequence 1:NP_001104460.2 Gene:spok / 5740359 FlyBaseID:FBgn0086917 Length:553 Species:Drosophila melanogaster
Sequence 2:NP_599196.2 Gene:Cyp2t1 / 171380 RGDID:620086 Length:497 Species:Rattus norvegicus


Alignment Length:556 Identity:132/556 - (23%)
Similarity:224/556 - (40%) Gaps:124/556 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLTSVFYVLFAIAITIILISYVFLLLKCKQKAFVVIGLLYQEKKYQCFDQAPGPHPWPIIGNI-- 63
            |:|....:|..:.:|::|:|:.:              |.:|.:.....|..|||.|.|::||:  
  Rat     1 MVTCEATLLLLLILTLMLMSWGW--------------LAHQARARMQKDLPPGPAPLPLLGNLLQ 51

  Fly    64 ---NLLGRFQYNPFYGFGTLTKKYGDIYSLSLGHTRCIVVNNVDLIKEVLNKNGKYFGGRPDFFR 125
               ..|.|....       |:.::|.::::.||....:|::....:::.|......|.||.....
  Rat    52 LQSGHLDRVLME-------LSSRWGPVFTVWLGPRPAVVLSGYAALRDALVLQADAFSGRGSMAV 109

  Fly   126 YHKLFGGDRNNSLALCD---WSQLQQKRRNLARRHCSPRESSSYFSKMSEIG-GL---------E 177
            :.:...|   |.:...:   |..|    ||.|            ...:.|.| |.         |
  Rat   110 FERFTHG---NGIVFSNGPRWRTL----RNFA------------LGALKEFGVGTSTIEERILEE 155

  Fly   178 VNQLLDQLTNISSGYPCDVKPLILAASANMFCQYMCSVRFNYSDKGFQKIIEYFDEIF------W 236
            ...:||:. ..:.|.|.|.:.|:..|.:|:.|..:...|:||.|..|.::::.|.:.|      |
  Rat   156 TACVLDEF-QATMGAPFDPRRLLDNAVSNVICTVVFGKRYNYGDPEFLRLLDLFSDNFRIMSSRW 219

  Fly   237 EINQGYSFDYIPWLVPFYCNHISRIVHWSASIRKFILERIVNHRESNININEPDKDFTDALLKSL 301
                |.:::..|..:.:......||......:|.||.|:|..||:|. ...|| :||.|..|:.:
  Rat   220 ----GETYNMFPSFMDWIPGPHHRIFKNFQELRLFISEQIQWHRQSR-QTGEP-RDFIDCFLEQM 278

  Fly   302 -KE----DKNVSRNTIIFMLED-FIGGHSAVGNLVMLALAYIAKNPTIALHIRNEVDTVSAKGIR 360
             ||    :.:....|::....: |.||.......:...|..:.|.|.:|..::.|:|....: .|
  Rat   279 DKEHQDPESHFQDETLVMTTHNLFFGGTETTSTTLRYGLLIMLKYPEVAAKVQEELDATVGR-TR 342

  Fly   361 RICLYDMNVMPYTMASISEVLRY-SSSPI-VPHVAMEDTVIKGFGVRKGTIVFINNYVLNMSESF 423
            ...|.|...:|||.|.:.|:.|: |..|: :|...:.|..::...:.|||      :|:.:..|.
  Rat   343 APSLADRAHLPYTNAVLHEIQRFISVLPLGLPRALIRDVNLRNHFLHKGT------FVIPLLVSA 401

  Fly   424 WNHPEQF-DPERFLENNFTNNKESGLKCDDNKRTEFIRKNDNDGSTKSKKYGKQNLNNKLLKKSI 487
            ...|.|| ||:.|...||         .||  :.||   .:||.                     
  Rat   402 HRDPTQFKDPDHFNPTNF---------LDD--QGEF---QNNDA--------------------- 431

  Fly   488 PQFLPFSVGKRTCIGQSLVRGFGFLLLANIIQNYNV 523
              |:||:.|||.|:|..|.|...||.|..|:|.:::
  Rat   432 --FMPFAPGKRMCLGAGLARSEIFLFLTAILQKFSL 465

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spokNP_001104460.2 CYP1_2-like 85..547 CDD:410710 113/467 (24%)
Cyp2t1NP_599196.2 cytochrome_P450 68..492 CDD:477761 113/468 (24%)

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