DRSC/TRiP Functional Genomics Resources

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Protein Alignment spok and CYP2D6

DIOPT Version :9

Sequence 1:NP_001104460.2 Gene:spok / 5740359 FlyBaseID:FBgn0086917 Length:553 Species:Drosophila melanogaster
Sequence 2:NP_000097.3 Gene:CYP2D6 / 1565 HGNCID:2625 Length:497 Species:Homo sapiens


Alignment Length:539 Identity:127/539 - (23%)
Similarity:220/539 - (40%) Gaps:110/539 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 ITIILISYVFLLLKCKQKAFVVIGLLYQEKKYQCFDQAPGPHPWPIIGNINLLGRFQYNPFYGFG 78
            :.:.:|..:||||         :.|:::.:::.. ...|||.|.|.:||: |...||..| |.|.
Human     7 VPLAVIVAIFLLL---------VDLMHRRQRWAA-RYPPGPLPLPGLGNL-LHVDFQNTP-YCFD 59

  Fly    79 TLTKKYGDIYSLSLGHTRCIVVNNVDLIKEVLNKNGKYFGGRPDFFRYHKLFGGDRNNSLALCDW 143
            .|.:::||::||.|..|..:|:|.:..::|.|..:|:....||.......|..|.|:..:.|..:
Human    60 QLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQILGFGPRSQGVFLARY 124

  Fly   144 SQLQQKRRNLARRHCSPRESSSYFSKMSEIGGLEVNQLLDQLTNIS----------SGYPCDVKP 198
            ....:::|         |.|.|....:    ||....|...:|..:          ||.|.....
Human   125 GPAWREQR---------RFSVSTLRNL----GLGKKSLEQWVTEEAACLCAAFANHSGRPFRPNG 176

  Fly   199 LILAASANMFCQYMCSVRFNYSDKGFQKIIEYFDEIFWEINQGYSFDYIPWLVPFYCNHISRIVH 263
            |:..|.:|:.....|..||.|.|..|.::::...|...| ..|:..:.:        |.:..::|
Human   177 LLDKAVSNVIASLTCGRRFEYDDPRFLRLLDLAQEGLKE-ESGFLREVL--------NAVPVLLH 232

  Fly   264 WSASIRKFI---------LERIVNHRESNININEPDKDFTDALLKSLKEDKN------VSRNTII 313
            ..|...|.:         |:.::.......:..:|.:|.|:|.|..:::.|.      ...|..|
Human   233 IPALAGKVLRFQKAFLTQLDELLTEHRMTWDPAQPPRDLTEAFLAEMEKAKGNPESSFNDENLRI 297

  Fly   314 FMLEDFIGGHSAVGNLVMLALAYIAKNPTIALHIRNEVDTVSAKGIRRICLYDMNVMPYTMASIS 378
            .:.:.|..|.......:...|..:..:|.:...::.|:|.|..: :||..:.|...||||.|.|.
Human   298 VVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQ-VRRPEMGDQAHMPYTTAVIH 361

  Fly   379 EVLRYSSSPIVP----HVAMEDTVIKGFGVRKGTIVFINNYVLNMSESFWNHPEQFDPERFLENN 439
            ||.|:..  |||    |:...|..::||.:.|||.:..|...:...|:.|..|.:|.||.||:  
Human   362 EVQRFGD--IVPLGVTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPEHFLD-- 422

  Fly   440 FTNNKESGLKCDDNKRTEFIRKNDNDGSTKSKKYGKQNLNNKLLKKSIPQ-FLPFSVGKRTCIGQ 503
                          .:..|::                           |: |||||.|:|.|:|:
Human   423 --------------AQGHFVK---------------------------PEAFLPFSAGRRACLGE 446

  Fly   504 SLVRGFGFLLLANIIQNYN 522
            .|.|...||...:::|:::
Human   447 PLARMELFLFFTSLLQHFS 465

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spokNP_001104460.2 p450 52..549 CDD:299894 121/501 (24%)
CYP2D6NP_000097.3 p450 58..493 CDD:278495 109/476 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45226
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.920

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