DRSC/TRiP Functional Genomics Resources

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Protein Alignment spok and CYP2C18

DIOPT Version :9

Sequence 1:NP_001104460.2 Gene:spok / 5740359 FlyBaseID:FBgn0086917 Length:553 Species:Drosophila melanogaster
Sequence 2:NP_000763.1 Gene:CYP2C18 / 1562 HGNCID:2620 Length:490 Species:Homo sapiens


Alignment Length:548 Identity:138/548 - (25%)
Similarity:231/548 - (42%) Gaps:124/548 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 AIAITIILISYVFLLLKCKQKAFVVIGLLYQEKKYQCFDQAPGPHPWPIIGNINLLGRFQYNPFY 75
            |:|: ::.:|.:|||...:|.:  ..|.|           ..||.|.||||||..|.....:.  
Human     4 AVAL-VLCLSCLFLLSLWRQSS--GRGRL-----------PSGPTPLPIIGNILQLDVKDMSK-- 52

  Fly    76 GFGTLTKKYGDIYSLSLGHTRCIVVNNVDLIKEVLNKNGKYFGGRPDFFRYHKLFGGDRNNSLAL 140
            .....:|.||.::::..|....:|::..:.:||.|..:|:.|.||..|....|:     |..|.:
Human    53 SLTNFSKVYGPVFTVYFGLKPIVVLHGYEAVKEALIDHGEEFSGRGSFPVAEKV-----NKGLGI 112

  Fly   141 C-----DWSQLQQ------KRRNLARRHCSPRESSSYFSKMSEIGGLEVNQLLDQL--TNISSGY 192
            .     .|.::::      :...:.:|....|...            |...|:::|  ||.|   
Human   113 LFSNGKRWKEIRRFCLMTLRNFGMGKRSIEDRVQE------------EARCLVEELRKTNAS--- 162

  Fly   193 PCDVKPLILAASANMFCQYMCSVRFNYSDKGFQKIIEYFDEIFWEINQGYSFDYIPWLVPFYCNH 257
            |||...::..|..|:.|..:...||:|.|:.|..::|.|:|....::.       ||:.  .||:
Human   163 PCDPTFILGCAPCNVICSVIFHDRFDYKDQRFLNLMEKFNENLRILSS-------PWIQ--VCNN 218

  Fly   258 ISRIVHW-----------SASIRKFILERIVNHRESNININEPDKDFTDALLKSLKEDKNVSRN- 310
            ...::.:           .|.|:.::||||..|:|| :::|.. :||.|..|..::::|:..:: 
Human   219 FPALIDYLPGSHNKIAENFAYIKSYVLERIKEHQES-LDMNSA-RDFIDCFLIKMEQEKHNQQSE 281

  Fly   311 ----TIIFMLEDFIG-GHSAVGNLVMLALAYIAKNPTIALHIRNEVDTVSAKGIRRICLYDMNVM 370
                ::|..:.|..| |.......:...|..:.|.|.:...::.|::.|..:. |..|:.|.:.|
Human   282 FTVESLIATVTDMFGAGTETTSTTLRYGLLLLLKYPEVTAKVQEEIECVVGRN-RSPCMQDRSHM 345

  Fly   371 PYTMASISEVLRYSS--SPIVPHVAMEDTVIKGFGVRKGTIVFIN-NYVLNMSESFWNHPEQFDP 432
            |||.|.:.|:.||..  ...:||....|...|.:.:.|||.:..: ..||:..:.|.| ||.|||
Human   346 PYTDAVVHEIQRYIDLLPTNLPHAVTCDVKFKNYLIPKGTTIITSLTSVLHNDKEFPN-PEMFDP 409

  Fly   433 ERFLENNFTNNKESGLKCDDNKRTEFIRKNDNDGSTKSKKYGKQNLNNKLLKKSIPQFLPFSVGK 497
            ..||                          |..|:.|...|                |:|||.||
Human   410 GHFL--------------------------DKSGNFKKSDY----------------FMPFSAGK 432

  Fly   498 RTCIGQSLVRGFGFLLLANIIQNYNVNS 525
            |.|:|:.|.|...||.|..|:||:|:.|
Human   433 RMCMGEGLARMELFLFLTTILQNFNLKS 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spokNP_001104460.2 p450 52..549 CDD:299894 129/507 (25%)
CYP2C18NP_000763.1 p450 30..487 CDD:306555 129/508 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45226
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.920

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