DRSC/TRiP Functional Genomics Resources

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Protein Alignment spok and CYP1A2

DIOPT Version :9

Sequence 1:NP_001104460.2 Gene:spok / 5740359 FlyBaseID:FBgn0086917 Length:553 Species:Drosophila melanogaster
Sequence 2:NP_000752.2 Gene:CYP1A2 / 1544 HGNCID:2596 Length:516 Species:Homo sapiens


Alignment Length:541 Identity:139/541 - (25%)
Similarity:230/541 - (42%) Gaps:80/541 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 AITIILISYVFLLLKCKQKAFVVIGLLYQEKKYQCFDQAPGPHPWPIIGNINLLGRFQYNPFYGF 77
            |..::|.|.:|.|:     .:|:.||  :.:..:.....|.|..||::|::..||:   ||....
Human    11 ATELLLASAIFCLV-----FWVLKGL--RPRVPKGLKSPPEPWGWPLLGHVLTLGK---NPHLAL 65

  Fly    78 GTLTKKYGDIYSLSLGHTRCIVVNNVDLIKEVLNKNGKYFGGRPDFFRYHKLFGGDRNNSLAL-C 141
            ..::::|||:..:.:|.|..:|::.:|.|::.|.:.|..|.||||.:....:..|   .||.. .
Human    66 SRMSQRYGDVLQIRIGSTPVLVLSRLDTIRQALVRQGDDFKGRPDLYTSTLITDG---QSLTFST 127

  Fly   142 DWSQLQQKRRNLARRHCS-------PRESSSYFSKMSEIGGLEVNQLLDQLTNISSGYPCDVKPL 199
            |...:...||.||:...:       |..|||.:  :.|....|...|:.:|..:.:| |....|.
Human   128 DSGPVWAARRRLAQNALNTFSIASDPASSSSCY--LEEHVSKEAKALISRLQELMAG-PGHFDPY 189

  Fly   200 --ILAASANMFCQYMCSVRFNYSDKGFQKIIEYFDEIFWEINQGYSFDYIPWLVPFYCNHISRIV 262
              ::.:.||:.........|..|......:::...|.....:.|...|:.| ::.:..|  ..:.
Human   190 NQVVVSVANVIGAMCFGQHFPESSDEMLSLVKNTHEFVETASSGNPLDFFP-ILRYLPN--PALQ 251

  Fly   263 HWSASIRKFI--LERIVNHRESNININEPDKDFTDALLKSLKEDKNVSRN-----TIIFMLEDFI 320
            .:.|..::|:  |::.|.....:.:.|.. :|.|.||.|..|:....|.|     .|:.::.|..
Human   252 RFKAFNQRFLWFLQKTVQEHYQDFDKNSV-RDITGALFKHSKKGPRASGNLIPQEKIVNLVNDIF 315

  Fly   321 G-GHSAVGNLVMLALAYIAKNPTIALHIRNEVDTVSAKGIRRICLYDMNVMPYTMASISEVLRYS 384
            | |...|...:..:|.|:...|.|...|:.|:|||..:. ||..|.|...:||..|.|.|..|:|
Human   316 GAGFDTVTTAISWSLMYLVTKPEIQRKIQKELDTVIGRE-RRPRLSDRPQLPYLEAFILETFRHS 379

  Fly   385 S-SPI-VPHVAMEDTVIKGFGVRKGTIVFINNYVLNMSESFWNHPEQFDPERFLENNFTNNKESG 447
            | .|. :||....||.:.||.:.|...||:|.:.:|.....|..|.:|.|||||           
Human   380 SFLPFTIPHSTTRDTTLNGFYIPKKCCVFVNQWQVNHDPELWEDPSEFRPERFL----------- 433

  Fly   448 LKCDDNKRTEFIRKNDNDGSTKSKKYGKQNLNNKLLKKSIPQFLPFSVGKRTCIGQSLVRGFGFL 512
                           ..||:.         :|..|.:|    .:.|.:|||.|||:.|.:...||
Human   434 ---------------TADGTA---------INKPLSEK----MMLFGMGKRRCIGEVLAKWEIFL 470

  Fly   513 LLANIIQNYNVNSADFSKIKL 533
            .||.::|....:.....|:.|
Human   471 FLAILLQQLEFSVPPGVKVDL 491

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spokNP_001104460.2 p450 52..549 CDD:299894 131/502 (26%)
CYP1A2NP_000752.2 p450 42..500 CDD:365848 131/503 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45226
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.920

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