DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment spok and Cyp2e1

DIOPT Version :9

Sequence 1:NP_001104460.2 Gene:spok / 5740359 FlyBaseID:FBgn0086917 Length:553 Species:Drosophila melanogaster
Sequence 2:NP_067257.1 Gene:Cyp2e1 / 13106 MGIID:88607 Length:493 Species:Mus musculus


Alignment Length:584 Identity:153/584 - (26%)
Similarity:250/584 - (42%) Gaps:136/584 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 IAITIILISYVFLLLKCKQKAFVVIGLLYQEKKYQCFDQAPGPHPWPIIGNINLLGRFQYN---- 72
            :.||:.|:.::..||        ::.:..|  .|:.::..|||.|.|..|||     ||.:    
Mouse     4 LGITVALLVWIATLL--------LVSIWKQ--IYRSWNLPPGPFPIPFFGNI-----FQLDLKDI 53

  Fly    73 PFYGFGTLTKKYGDIYSLSLGHTRCIVVNNVDLIKEVLNKNGKYFGGRPDF--FRYHKLFGGDRN 135
            | .....|.|::|.:::|.||..|.:|::....:||||..:...|.||.|.  |:.:|..|...|
Mouse    54 P-KSLTKLAKRFGPVFTLHLGQRRIVVLHGYKAVKEVLLNHKNEFSGRGDIPVFQEYKNKGIIFN 117

  Fly   136 N----------SLA-LCDWSQLQQKRRNLARRHCSPRESSSYFSKMSEIGGLEVNQLLDQLTNIS 189
            |          ||: |.||...:|......:|                    |.:.|:::|.. :
Mouse   118 NGPTWKDVRRFSLSILRDWGMGKQGNEARIQR--------------------EAHFLVEELKK-T 161

  Fly   190 SGYPCDVKPLILAASANMFCQYMCSVRFNYSDKGFQKIIEYFDEIFWEIN----QGYSF--DYIP 248
            .|.|.|...||..|..|:....:.:.||:|.||...:::..|:|.|:.::    |.|::  ||:.
Mouse   162 KGQPFDPTFLIGCAPCNVIADILFNKRFDYDDKKCLELMSLFNENFYLLSTPWIQAYNYFSDYLQ 226

  Fly   249 WLVPFYCNHISRIVHWSASIRKFILERIVNHRESNININEPDKDFTDALLKSLKEDKN------V 307
            :|...:    .:::...:.||::.|.:...|.:| ::||.| :|.||.||..::::|:      .
Mouse   227 YLPGSH----RKVMKNVSEIRQYTLGKAKEHLKS-LDINCP-RDVTDCLLIEMEKEKHSQEPMYT 285

  Fly   308 SRNTIIFMLEDFIGGHSAVGNLVMLALAYIAKNPTIALHIRNEVDTVSAKGIRRICLYDMNVMPY 372
            ..|..:.:.:.|..|.......:...|..:.|.|.|...:..|:|.|.... |...:.|...|||
Mouse   286 MENISVTLADLFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEIDRVIGPS-RAPAVRDRMNMPY 349

  Fly   373 TMASISEVLRYSS--SPIVPHVAMEDTVIKGFGVRKGTIV-------FINNYVLNMSESFWNHPE 428
            ..|.:.|:.|:.:  ...:||.|..|||.:|:.:.|||:|       ..:||.       :..||
Mouse   350 MDAVVHEIQRFINLVPSNLPHEATRDTVFRGYVIPKGTVVIPTLDSLLFDNYE-------FPDPE 407

  Fly   429 QFDPERFLENNFTNNKESGLKCDDNKRTEFIRKNDNDGSTKSKKYGKQNLNNKLLKKSIPQFLPF 493
            .|.||.||..|                          |..|...|                |..|
Mouse   408 TFKPEHFLNEN--------------------------GKFKYSDY----------------FKAF 430

  Fly   494 SVGKRTCIGQSLVRGFGFLLLANIIQNYNVNS-ADFSKIKLEKSSI---ALPKKCFKLSLRPRT 553
            |.|||.|:|:.|.|...||||:.|:|::|:.| .|...|.|...:|   ::|:: |||.:.||:
Mouse   431 SAGKRVCVGEGLARMELFLLLSAILQHFNLKSLVDPKDIDLSPVTIGFGSIPRE-FKLCVIPRS 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spokNP_001104460.2 p450 52..549 CDD:299894 144/538 (27%)
Cyp2e1NP_067257.1 p450 44..489 CDD:278495 138/528 (26%)
Substrate binding. /evidence=ECO:0000250 298..303 1/4 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45226
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.