DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment spok and Cyp2d9

DIOPT Version :9

Sequence 1:NP_001104460.2 Gene:spok / 5740359 FlyBaseID:FBgn0086917 Length:553 Species:Drosophila melanogaster
Sequence 2:NP_034136.2 Gene:Cyp2d9 / 13105 MGIID:88606 Length:504 Species:Mus musculus


Alignment Length:540 Identity:121/540 - (22%)
Similarity:227/540 - (42%) Gaps:106/540 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 IILISYVFLLLKCKQKAFVVIGLLYQEKKYQCFDQAPGPHPWPIIGNINL--LGRFQYNPFYGFG 78
            :.:.:.:|:||         :.|.:|.:::.. ...|||.|||::||:..  ||...|:.:    
Mouse    12 VAIFTVIFILL---------VDLTHQRQRWTS-RYPPGPVPWPVLGNLLQVDLGNMPYSLY---- 62

  Fly    79 TLTKKYGDIYSLSLGHTRCIVVNNVDLIKEVLNKNGKYFGGRP--DFFRYHKLFGGDRNNSLALC 141
            .|..:|||::||.:.....:|:|.:..:||:|...|:....||  ..|.|..:..|.:...||..
Mouse    63 KLQNRYGDVFSLQMAWKPMVVINGLKAMKEMLLTCGEDTADRPPVPIFEYLGVKPGSQGVVLAPY 127

  Fly   142 DWSQLQQKR------RNLARRHCSPRESSSYFSKMSEIGGLEVNQLLDQLTNISSGYPCDVKPLI 200
            .....:|:|      ||..   ...:....:.:|       |.|.|.|..| ..:|.|.:..|::
Mouse   128 GPEWREQRRFSVSTLRNFG---LGKKSLEDWVTK-------EANHLCDAFT-AQAGQPINPNPML 181

  Fly   201 LAASANMFCQYMCSVRFNYSDKGFQKIIEYFDEIFWEINQGYSFDYIPWLVPFYCN------HIS 259
            ..::.|:....:.:.||.|.|....::::..::...|::         .|:|...|      .|.
Mouse   182 NKSTCNVIASLIFARRFEYEDPFLIRMLKVLEQSLTEVS---------GLIPEVLNAFPILLRIP 237

  Fly   260 RIVHWSASIRK---FILERIVNHRESNININEPDKDFTDALLKSLKEDK-----NVSRNTIIFML 316
            |:...:...:|   .||:.::....:..:..:..::.|||.|..:::.|     :.:...::.::
Mouse   238 RLADKALQGQKSFIAILDNLLTENRTTWDPVQAPRNLTDAFLAEIEKAKGNPESSFNDENLLMVV 302

  Fly   317 EDFIG-GHSAVGNLVMLALAYIAKNPTIALHIRNEVDTVSAKGIRRICLYDMNVMPYTMASISEV 380
            .|..| |.......:..||..:..:|.:...::.|:|.|..: :|...:.|...||||.|.|.||
Mouse   303 RDLFGAGMLTTSTTLSWALMLMILHPDVQRRVQQEIDEVIGQ-VRHPEMADQAHMPYTNAVIHEV 366

  Fly   381 LRYSS-SPI-VPHVAMEDTVIKGFGVRKGTIVFINNYVLNMSESFWNHPEQFDPERFLENNFTNN 443
            .|:.. .|: :|.:...|..::.|.:.||||:..|...:...||.|..|.:|.||.||:      
Mouse   367 QRFGDIVPVNLPRITSHDIEVQDFLIPKGTILLPNMSSMLKDESVWEKPLRFHPEHFLD------ 425

  Fly   444 KESGLKCDDNKRTEFIRKNDNDGSTKSKKYGKQNLNNKLLKKSIPQ-FLPFSVGKRTCIGQSLVR 507
                      .:..|::                           |: |:|||.|:|:|:|::|.|
Mouse   426 ----------AQGHFVK---------------------------PEAFMPFSAGRRSCLGEALAR 453

  Fly   508 GFGFLLLANIIQNYNVNSAD 527
            ...||....::|.::.:..|
Mouse   454 MELFLFFTCLLQRFSFSVPD 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spokNP_001104460.2 p450 52..549 CDD:299894 116/504 (23%)
Cyp2d9NP_034136.2 p450 37..496 CDD:278495 116/505 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45226
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

Return to query results.
Submit another query.