DRSC/TRiP Functional Genomics Resources

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Protein Alignment spok and Cyp2c40

DIOPT Version :10

Sequence 1:NP_001104460.2 Gene:spok / 5740359 FlyBaseID:FBgn0086917 Length:553 Species:Drosophila melanogaster
Sequence 2:NP_034134.3 Gene:Cyp2c40 / 13099 MGIID:1306815 Length:491 Species:Mus musculus


Alignment Length:550 Identity:152/550 - (27%)
Similarity:241/550 - (43%) Gaps:113/550 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 YVFLLLKCKQKAFVVIGLLYQEKKYQCFDQAPGPHPWPIIGNINL-----LGRFQYNPFYGFGTL 80
            :|.|:| |  .:|:::..|::::..: .:..|||.|.|||||.:|     :|:...|       .
Mouse     4 FVVLVL-C--LSFLLVLSLWRQRSAR-GNLPPGPTPLPIIGNYHLIDMKDIGQCLTN-------F 57

  Fly    81 TKKYGDIYSLSLGHTRCIVVNNVDLIKEVLNKNGKYFGGR---PDFFRYH--KLFGGDRNNSLAL 140
            :|.||.:::|..|....:|::..:.|||.|..:|:.|.||   |.|.:..  |..|....|.   
Mouse    58 SKTYGPVFTLYFGSQPIVVLHGYEAIKEALIDHGEEFSGRGRIPVFDKVSTGKGIGFSHGNV--- 119

  Fly   141 CDWSQLQQKRRNLARRHCSPRESSSYFSKMSEIGGLEVNQLLDQLTNISSGYPCDVKPLILAASA 205
              |...:....|..|.....:.:..  :|:.|    |...|:.:|.. ::|.|||.:.:|..|..
Mouse   120 --WKATRVFTVNTLRNLGMGKRTIE--NKVQE----EAQWLMKELKK-TNGSPCDPQFIIGCAPC 175

  Fly   206 NMFCQYMCSVRFNYSDKGFQKIIEYFDEIFWEI--NQGYS-FDYIPWLVPFYC----NHISRIVH 263
            |:.|..:...||:|.||.|..:|...:|. .||  :.|.. |:.:|.|:. ||    |.:.:...
Mouse   176 NVICSIVFQNRFDYKDKDFLSLIGKVNEC-TEILSSPGCQIFNAVPILID-YCPGSHNKLFKNHT 238

  Fly   264 WSASIRKFILERIVNHRESNININEPDKDFTDALLKSLKEDKNVSR-----NTIIFMLEDFI-GG 322
            |   |:.::|.:|..|.|| :::..| :||.|..|...::...:..     ..:..::.|.: ||
Mouse   239 W---IKSYLLGKIKEHEES-LDVTNP-RDFIDYFLIQRRQKNGIEHMDYTIEHLATLVTDLVFGG 298

  Fly   323 HSAVGNLVMLALAYIAKNPTIALHIRNEVDTVSAKGIRRICLYDMNVMPYTMASISEVLRY-SSS 386
            ...:.:.:..||..:.|:..|...::.|:|.|..:. |..|:.|.|.||||.|.:.||.|| ...
Mouse   299 TETLSSTMRFALLLLMKHTHITAKVQEEIDNVIGRH-RSPCMQDRNHMPYTNAMVHEVQRYIDLG 362

  Fly   387 PI-VPHVAMEDTVIKGFGVRKGTIVFIN-NYVLNMSESFWNHPEQFDPERFLENNFTNNKESGLK 449
            |. |.|....||..:.:.:.|||.|..: ..||:.|..|.| ||.|||..||::|          
Mouse   363 PNGVVHEVTCDTKFRNYFIPKGTQVMTSLTSVLHDSTEFPN-PEVFDPGHFLDDN---------- 416

  Fly   450 CDDNKRTEFIRKNDNDGSTKSKKYGKQNLNNKLLKKSIPQFLPFSVGKRTCIGQSLVRGFGFLLL 514
                            |:.|...|                |:|||.|||.|:|:||.|...||.|
Mouse   417 ----------------GNFKKSDY----------------FVPFSAGKRICVGESLARMELFLFL 449

  Fly   515 ANIIQNYNV-------------NSADFSKI 531
            ..|:||:.:             ..:.||||
Mouse   450 TTILQNFKLKPLVDPKDIDMTPKHSGFSKI 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spokNP_001104460.2 CYP1_2-like 85..547 CDD:410710 131/480 (27%)
Cyp2c40NP_034134.3 CYP2C-like 61..485 CDD:410758 132/481 (27%)

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