DRSC/TRiP Functional Genomics Resources

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Protein Alignment spok and Cyp2c38

DIOPT Version :10

Sequence 1:NP_001104460.2 Gene:spok / 5740359 FlyBaseID:FBgn0086917 Length:553 Species:Drosophila melanogaster
Sequence 2:NP_034132.2 Gene:Cyp2c38 / 13097 MGIID:1306819 Length:490 Species:Mus musculus


Alignment Length:566 Identity:143/566 - (25%)
Similarity:235/566 - (41%) Gaps:119/566 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 LISYVFLLLKCKQKAFVVIGLLYQEKKYQCFDQAPGPHPWPIIGNINLLGRFQYNPFYGFGTLTK 82
            |::::.|.|    .:.:::.|..|..:....  .|||.|:|||||...:....:|  ......:|
Mouse     3 LVTFLVLTL----SSLILLSLWRQRSRRGRL--PPGPTPFPIIGNFLQIDVKNFN--QSLTNFSK 59

  Fly    83 KYGDIYSLSLGHTRCIVVNNVDLIKEVLNKNGKYFGGRPDFFRYHKLFGGDRNNSLALC-----D 142
            .||.:::|.||....:|::..:.:||.|..:|:.|.||.:.....|:     ||.|.:.     .
Mouse    60 TYGPVFTLYLGSRPIVVLHGYEAVKEALIDHGEEFSGRENIPMSEKI-----NNGLGITFSNGNS 119

  Fly   143 WSQLQQ----KRRNL--ARRHCSPRESSSYFSKMSEIGGLEVNQLLDQLTNISSGYPCDVKPLIL 201
            |.:.::    ..|||  .:|:...|...            |...|:::|.. :.|.|||...::.
Mouse   120 WKETRRFTLMTLRNLGMGKRNIEDRVRE------------EAQCLVEELRK-TKGSPCDPTFILS 171

  Fly   202 AASANMFCQYMCSVRFNYSDKGFQKIIEYFDEIFWEINQGYSFDYIPWLVPFYCNHISRIVHWSA 266
            .|..|:.|..:...||:|.||.|..:::       ::|:.......|||.  .||:...::.:..
Mouse   172 CAPCNVICSIIFQDRFDYKDKDFLMLMK-------KLNENVKILSSPWLQ--VCNNFPLLIDYCP 227

  Fly   267 S-----------IRKFILERIVNHRESNININEPDKDFTDALLKSLKEDKNVSR------NTIIF 314
            .           ||.::||::..|:|| :::..| :||.|..|...|:..::.:      |.:..
Mouse   228 GSHHKVLKNFKYIRSYLLEKVKEHQES-LDVTNP-RDFIDYFLIKQKQANHIEQAEYSLENLVCT 290

  Fly   315 MLEDFIGGHSAVGNLVMLALAYIAKNPTIALHIRNEVDTVSAKGIRRICLYDMNVMPYTMASISE 379
            :...|..|.......:..||..:.|.|.:...::.|:|.|..:. |..|:.|.:.||||.|.|.|
Mouse   291 INNLFAAGTETTSTTLRYALLLLMKYPDVTAKVQEEIDHVVGRH-RSPCMQDRSRMPYTDAMIHE 354

  Fly   380 VLRYSS--SPIVPHVAMEDTVIKGFGVRKGTIVFIN-NYVLNMSESFWNHPEQFDPERFLENNFT 441
            |.|:.:  ...:||....|...:.:.:.|||.|..: ..||:.|:.|.| ||.|||..||:.|  
Mouse   355 VQRFINLVPNNLPHAVTCDIKFRNYIIPKGTTVVTSLTSVLHDSKEFPN-PEMFDPGHFLDAN-- 416

  Fly   442 NNKESGLKCDDNKRTEFIRKNDNDGSTKSKKYGKQNLNNKLLKKSIPQFLPFSVGKRTCIGQSLV 506
                                    |:.|...|                |:.||.|||.|.|:.|.
Mouse   417 ------------------------GNFKKSDY----------------FMTFSAGKRVCAGEGLA 441

  Fly   507 RGFGFLLLANIIQNYNVNS----ADFSKIKLEKSSIALP---KKCF 545
            |...||:|..|:||:.:.|    .|...|......|.||   :.||
Mouse   442 RMELFLILTTILQNFKLKSLVHPKDIDMIPFVNGLITLPPHYQLCF 487

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spokNP_001104460.2 CYP1_2-like 85..547 CDD:410710 126/499 (25%)
Cyp2c38NP_034132.2 CYP2C-like 61..485 CDD:410758 125/496 (25%)

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