DRSC/TRiP Functional Genomics Resources

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Protein Alignment spok and Cyp2a12

DIOPT Version :9

Sequence 1:NP_001104460.2 Gene:spok / 5740359 FlyBaseID:FBgn0086917 Length:553 Species:Drosophila melanogaster
Sequence 2:NP_598418.1 Gene:Cyp2a12 / 13085 MGIID:105055 Length:492 Species:Mus musculus


Alignment Length:488 Identity:126/488 - (25%)
Similarity:213/488 - (43%) Gaps:81/488 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 PGPHPWPIIGNINLLGRFQYNPFYGFGTLTKKYGDIYSLSLGHTRCIVVNNVDLIKEVLNKNGKY 116
            |||.|.|.|||...|.|  .:.:.....|.:.||.::::.||..|.:|:...|.:||.|..:.:.
Mouse    34 PGPIPLPFIGNYLQLNR--KDVYSSITQLQEHYGPVFTIHLGPRRVVVLYGYDAVKEALVDHAEE 96

  Fly   117 FGGRPDFFRYHKLFGGDRNNSLALCDWSQLQQKRR---------NLARRHCSPRESSSYFSKMSE 172
            |.||.:...::.||.|   ..:|..:..:.:|.||         .:.:|....|        :.|
Mouse    97 FSGRGEQATFNTLFKG---YGVAFSNGERAKQLRRFSIATLRDFGMGKRGVEER--------IQE 150

  Fly   173 IGGLEVNQLLDQLTNISSGYPCDVKPLILAASANMFCQYMCSVRFNYSDKGFQKIIEYFDEI--F 235
            ..|..:..|..     :.|.|.|....:...::|:....:...||||.||.|..:::...::  |
Mouse   151 EAGCLIKMLQG-----TCGAPIDPTIYLSKTASNVISSIVFGDRFNYEDKEFLSLLQMMGQVNKF 210

  Fly   236 WEINQGYSFDYIPWLVPFYCNHISRIVHWSASIRKFILERIVNHRESNININEPDKDFTDALLKS 300
            .....|..:|....::.:......:|:..|..:..|:::: |...:|.::.|.| :||.|:.|..
Mouse   211 AASPTGQLYDMFHSVMKYLPGPQQQIIKDSHKLEDFMIQK-VKQNQSTLDPNSP-RDFIDSFLIH 273

  Fly   301 LKEDKNVS-----RNTIIFMLEDFIGGHSAVGNLVMLALAYIAKNPTIALHIRNEVDTVSAKGIR 360
            ::::|.|:     :|.::..|..|..|...|.:.:......:.|:|.:...:..|:|.|..:. |
Mouse   274 MQKEKYVNSEFHMKNLVMTSLNLFFAGSETVSSTLRYGFLLLMKHPDVEAKVHEEIDRVIGRN-R 337

  Fly   361 RICLYDMNVMPYTMASISEVLRYSS-SPI-VPHVAMEDTVIKGFGVRKGTIVFINNYVLNMSESF 423
            :....|...||||.|.|:|:.|:|: :|: :|....:||..:||.:.|||.||.....|.....|
Mouse   338 QPQYEDHMKMPYTQAVINEIQRFSNFAPLGIPRRITKDTSFRGFFLPKGTEVFPILGSLMTDPKF 402

  Fly   424 WNHPEQFDPERFLENNFTNNKESGLKCDDNKRTEFIRKNDNDGSTKSKKYGKQNLNNKLLKKSIP 488
            ::.|:.|:|:.||                          |:.|.               ||| ||
Mouse   403 FSSPKDFNPQHFL--------------------------DDKGQ---------------LKK-IP 425

  Fly   489 QFLPFSVGKRTCIGQSLVRGFGFLLLANIIQNY 521
            .|||||.|||.|:|.||.:...||....|:||:
Mouse   426 AFLPFSTGKRFCLGDSLAKMELFLFFTTILQNF 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spokNP_001104460.2 p450 52..549 CDD:299894 126/488 (26%)
Cyp2a12NP_598418.1 p450 33..489 CDD:278495 126/488 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45226
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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