DRSC/TRiP Functional Genomics Resources

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Protein Alignment spok and Cyp2c50

DIOPT Version :10

Sequence 1:NP_001104460.2 Gene:spok / 5740359 FlyBaseID:FBgn0086917 Length:553 Species:Drosophila melanogaster
Sequence 2:NP_598905.2 Gene:Cyp2c50 / 107141 MGIID:2147497 Length:490 Species:Mus musculus


Alignment Length:545 Identity:150/545 - (27%)
Similarity:230/545 - (42%) Gaps:123/545 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 IAITIILISYVFLLLKCKQKAFVVIGLLYQEKKYQCFDQAPGPHPWPIIGNINLLGRFQYNP--- 73
            |.:.:..:|.:|||...:|.:        :..|.     .|||.|.||||||     .|.|.   
Mouse     4 ILVLVFTLSCLFLLSLWRQSS--------ERGKL-----PPGPTPLPIIGNI-----LQINVKDI 50

  Fly    74 FYGFGTLTKKYGDIYSLSLGHTRCIVVNNVDLIKEVLNKNGKYFGGRPDFFRYHKLFGG-----D 133
            ...|..|:|.||.:|:|.||....:|::..:.:||.|..:|:.|.||.....:.|...|     .
Mouse    51 CQSFTNLSKVYGPVYTLYLGRKPTVVLHGYEAVKEALVDHGEEFAGRGRLPVFDKATNGMGIIFS 115

  Fly   134 RNNSLALCDWSQLQQ----KRRNL--ARRHCSPRESSSYFSKMSEIGGLEVNQLLDQLTNISSGY 192
            :.|.     |...::    ..|||  .:|....|...            |...|:::|.. ::|.
Mouse   116 KGNV-----WKNTRRFSLTTLRNLGMGKRSIEDRVQE------------EARCLVEELRK-TNGS 162

  Fly   193 PCDVKPLILAASANMFCQYMCSVRFNYSDKGFQKIIEYFDEIFWEINQGYSFDYIPWL-----VP 252
            |||...::..|..|:.|..:...||:|.|:.|..::|..:||...::       .|||     .|
Mouse   163 PCDPTFILGCAPCNVICSIIFQDRFDYKDRDFLNLMEKLNEITKIMS-------TPWLQVCNTFP 220

  Fly   253 F---YC--NHISRIVHWSASIRKFILERIVNHRESNININEPDKDFTDALLKSLKED------KN 306
            .   ||  :| :::....|.|:.|:||:|..|.|| :::..| :||.|..|.:..::      ||
Mouse   221 VLLDYCPGSH-NKVFKNYACIKNFLLEKIKEHEES-LDVTIP-RDFIDYFLINGGQENGNYPLKN 282

  Fly   307 VSRNTIIFMLEDFIGGHSAVGNLVMLALAYIAKNPTIALHIRNEVDTVSAKGIRRICLYDMNVMP 371
            ...:..|.:.:.|..|.......:..||..:.|.|.:...::.|::.|..|. ||.|:.|.:.||
Mouse   283 RLEHLAITVTDLFSAGTETTSTTLRYALLLLLKYPHVTAKVQEEIEHVIGKH-RRPCMQDRSHMP 346

  Fly   372 YTMASISEVLRYSS--SPIVPHVAMEDTVIKGFGVRKGTIVFIN-NYVLNMSESFWNHPEQFDPE 433
            ||.|.|.||.|:..  ...:||....|...:.:.:.|||.|..: :.||..|:.|.| ||:|||.
Mouse   347 YTDAMIHEVQRFIDLVPNSLPHEVTCDIKFRNYFIPKGTNVITSLSSVLRDSKEFPN-PEKFDPG 410

  Fly   434 RFLENNFTNNKESGLKCDDNKRTEFIRKNDNDGSTKSKKYGKQNLNNKLLKKSIPQFLPFSVGKR 498
            .||:.|                          |..|...|                |:|||.|||
Mouse   411 HFLDEN--------------------------GKFKKSDY----------------FMPFSTGKR 433

  Fly   499 TCIGQSLVRGFGFLLLANIIQNYNV 523
            .|.|:.|.|...||.|.:|:||:|:
Mouse   434 ICAGEGLARMELFLFLTSILQNFNL 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spokNP_001104460.2 CYP1_2-like 85..547 CDD:410710 127/469 (27%)
Cyp2c50NP_598905.2 CYP2C-like 61..485 CDD:410758 128/470 (27%)

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