DRSC/TRiP Functional Genomics Resources

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Protein Alignment spok and cyp1b1

DIOPT Version :10

Sequence 1:NP_001104460.2 Gene:spok / 5740359 FlyBaseID:FBgn0086917 Length:553 Species:Drosophila melanogaster
Sequence 2:XP_002933924.1 Gene:cyp1b1 / 100490477 XenbaseID:XB-GENE-951460 Length:550 Species:Xenopus tropicalis


Alignment Length:207 Identity:39/207 - (18%)
Similarity:71/207 - (34%) Gaps:70/207 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   225 RLEAEAKARKEEHDRADELAKDKEELEAEREKLIRTTKKLKDDLQNVKNELKMT-NEMKKTLEQE 288
            ||:||.:|.:.|.....|..::.:.|..|:...:...:.:..|:..::|.:|.: |::.|.||..
 Frog     7 RLKAEFEALESEERHLKEYKQEMDLLLQEKMAHVEELRLIHADINVMENTIKQSENDLNKLLEST 71

  Fly   289 KM---SLNSKTEHLQANMESLNIEKEKIHEQLQEIVREREKVLIDNQNLSTDKCQLNNRLMEIET 350
            :.   ......||:.|...:|.:::      |.::..|.||:.:|                    
 Frog    72 RRLHDEYKPLKEHVDALRMTLGLQR------LPDLCEEEEKLSLD-------------------- 110

  Fly   351 SRNCIMTEKEKIENLLKMNEQKTQDLEKERQYYTMKTSELMDHLKEVSEQRDLTESELKEQMMAR 415
                 ..||:|.|                                   .|.:..|..:.|.:.|.
 Frog   111 -----YFEKQKAE-----------------------------------WQTEPQEPPIPESLAAA 135

  Fly   416 LGAEKQLQAAEK 427
            ..|.:|||.|.|
 Frog   136 AAAAQQLQVARK 147

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spokNP_001104460.2 CYP1_2-like 85..547 CDD:410710 39/207 (19%)
cyp1b1XP_002933924.1 CYP1B1-like 78..528 CDD:410768 23/136 (17%)

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