DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment spok and cyp1b1

DIOPT Version :9

Sequence 1:NP_001104460.2 Gene:spok / 5740359 FlyBaseID:FBgn0086917 Length:553 Species:Drosophila melanogaster
Sequence 2:XP_002933924.1 Gene:cyp1b1 / 100490477 XenbaseID:XB-GENE-951460 Length:550 Species:Xenopus tropicalis


Alignment Length:545 Identity:135/545 - (24%)
Similarity:226/545 - (41%) Gaps:109/545 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 QAPGPHPWPIIGNINLLGRFQYNPFYGFGTLTKKYGDIYSLSLGHTRCIVVNNVDLIKEVLNKNG 114
            |.|||.|||:.||...:|.:   |...|..|.|:||:|:.:.||..:.:|:|...:|:..|...|
 Frog    47 QPPGPFPWPLFGNALQMGSY---PHLAFIDLAKRYGNIFQIKLGSQKIVVLNGDLVIRHALLHKG 108

  Fly   115 KYFGGRPDFFRYHKLFGGDRNNSLALCDWSQLQQKRRNLARRHCSPRESSSYFSK----MSEIGG 175
            :.|.|||.|..|..:.||   .|||...:::..:..|.||  |.:.|..|:...:    ::|...
 Frog   109 EDFAGRPKFTSYQFVSGG---RSLAFGCYTEKWKAHRKLA--HSTVRAFSTGNPQTKRCLAENVL 168

  Fly   176 LEVNQLLDQLTNISSG----YPCDVKPLILAASANMFCQYMCSVRFNYSDKGFQKIIEYFDEIFW 236
            .|...|:...:.:..|    ||   ....:.:.||:........|:.:.|..||.::...|:...
 Frog   169 KEARDLIALFSELGQGGKYFYP---GRHTVVSVANVMSAVCFGRRYQHGDLEFQSLLSNNDKFTR 230

  Fly   237 EINQGYSFDYIPWLVPFYCNHISRIVHWSASIR----KFILERIVNHRESNININEPDKDFTDAL 297
            .:..|...|.:|||..| .|.:..:......:.    .|:.::.:.||  |.......:|..||.
 Frog   231 SVGAGSLVDVMPWLQRF-PNPVRSVFRSFQQVNYEFYDFVYKKFLLHR--NTANQAVTRDMMDAF 292

  Fly   298 LKSL--------------KEDKNVSRNTIIFMLE---------DFIG-GHSAVGNLVMLALAYIA 338
            :..|              .|:|..:.......||         |..| ....:...:...:.::.
 Frog   293 IHILITKEGKVRADDADGGEEKGKNGQYFFHSLEAEHVPSTVTDIFGASQDTLSTALQWVIFFLV 357

  Fly   339 KNPTIALHIRNEVDTVSAKGIRRICLYDMNVMPYTMASISEVLRYSS-SPI-VPHVAMEDTVIKG 401
            :.|.|...:::|:|.|..|. |..|:.|...:||.||.:.|.:|:|| .|| :||...::|.|.|
 Frog   358 RYPEIQTKLQDEMDRVIGKD-RLPCIEDQPKLPYLMAFLYEFMRFSSFVPITIPHATTKNTTIMG 421

  Fly   402 FGVRKGTIVFINNYVLNMSESFWNHPEQFDPERFLENNFTNNKESGLKCDDNKRTEFIRKNDNDG 466
            :.:.|.|:||:|.:.:|.....|::|.:|:|.|||::|...||:                     
 Frog   422 YQIPKDTVVFVNQWSVNHDPQKWSNPGEFNPSRFLDDNGLINKD--------------------- 465

  Fly   467 STKSKKYGKQNLNNKLLKKSIPQFLPFSVGKRTCIGQSLVR----GFGFLLLANIIQNYNVNSAD 527
                               .:...:.||||||.|||:.|.:    .|..:||...|         
 Frog   466 -------------------LVSNIMIFSVGKRRCIGEELSKIQLFMFSSILLHQCI--------- 502

  Fly   528 FSKIKLEKSSIALPKKCFKLSLRPR 552
            |:.:..:..:   ||..:.||::|:
 Frog   503 FTALPADNLN---PKGDYGLSIKPK 524

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spokNP_001104460.2 p450 52..549 CDD:299894 132/538 (25%)
cyp1b1XP_002933924.1 p450 48..530 CDD:365848 134/544 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45226
OrthoDB 1 1.010 - - D278622at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.930

Return to query results.
Submit another query.