DRSC/TRiP Functional Genomics Resources

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Protein Alignment spok and LOC100361492

DIOPT Version :9

Sequence 1:NP_001104460.2 Gene:spok / 5740359 FlyBaseID:FBgn0086917 Length:553 Species:Drosophila melanogaster
Sequence 2:XP_003749152.1 Gene:LOC100361492 / 100361492 RGDID:2320073 Length:488 Species:Rattus norvegicus


Alignment Length:584 Identity:142/584 - (24%)
Similarity:254/584 - (43%) Gaps:140/584 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 AIAITIILISYVFLLLKCKQKAFVVIGLLYQEKKYQCFDQAPGPHPWPIIGNI---------NLL 66
            |:.:.::::|.:.||...:|.:        :.:|.     .|||.|.||||||         ..:
  Rat     3 AVLVLVLILSSLLLLSFWRQNS--------ERRKL-----PPGPTPLPIIGNILQIDVKDISKSI 54

  Fly    67 GRFQYNPFYGFGTLTKKYGDIYSLSLGHTRCIVVNNVDLIKEVLNKNGKYFGGRPDFFRYHKLFG 131
            .:|           ::.||.:::|..|....:||...:::||||  :|:.|.||..|....|:  
  Rat    55 KKF-----------SEVYGPVFTLYFGLKPTVVVYGYEVVKEVL--DGEEFSGRGVFPIVTKV-- 104

  Fly   132 GDRNNSLAL-----CDWSQLQQ------KRRNLARRHCSPRESSSYFSKMSEIGGLEVNQLLDQL 185
               ||.|.:     ..|.:|::      :...:.:|....|...            |.:.|:::|
  Rat   105 ---NNDLGVIFSNGTKWKELRRFSLMTLRNFGMGKRSIEDRIQE------------EASCLVEEL 154

  Fly   186 TNISSGYPCDVKPLILAASANMFCQYMCSVRFNYSDKGFQKIIEYFDEIFWEINQGYSFDYIPWL 250
            .. ::|..||...::..|.:|:.|..:...||:|.|:.|..::|.|:|.|..:|.       ||:
  Rat   155 RK-TNGSLCDPTFILSCAPSNVICSVIFHNRFDYKDENFLNLMEKFNENFKILNS-------PWM 211

  Fly   251 -----VPFYCNHI----SRIVHWSASIRKFILERIVNHRESNININEPDKDFTDALLKSLKEDKN 306
                 :|.:.:::    ::::...|.|:.:||.|:..|:|: ::::.| :||.|..|..::::|:
  Rat   212 QVCNAIPAFIDYLPGSHNKVIKNFAEIKSYILRRVKEHQET-LDMDNP-RDFIDCFLIKIEQEKH 274

  Fly   307 ------VSRNTIIFMLEDFIGGHSAVGNLVMLALAYIAKNPTIALHIRNEVDTVSAKGIRRICLY 365
                  ..::.:..:.:.|:.|.......:...|..:.|:..:...::.|:|.|..:. ||.|:.
  Rat   275 NPCTEFTIQSLVATVTDVFVAGSETTSTTLRYGLLLLLKHTEVTAKVQEEIDHVIGRH-RRPCMQ 338

  Fly   366 DMNVMPYTMASISEVLRYSS--SPIVPHVAMEDTVIKGFGVRKGT-IVFINNYVLNMSESFWNHP 427
            |...||||.|.:.|:.||.:  ...|||.|..:...:.:.:.||| ::.....||:..:.|.| |
  Rat   339 DRTRMPYTDAMVHEIQRYINLIPNNVPHAATCNVRFRNYVIPKGTDLITSLTSVLHDDKEFPN-P 402

  Fly   428 EQFDPERFLENNFTNNKESGLKCDDNKRTEFIRKNDNDGSTKSKKYGKQNLNNKLLKKSIPQFLP 492
            |.|||..||                          |..|:.|...|                |:|
  Rat   403 EVFDPGHFL--------------------------DEHGNFKRSDY----------------FMP 425

  Fly   493 FSVGKRTCIGQSLVRGFGFLLLANIIQNYNVNS----ADFSKIKLEKSSIALPKKCFKLSLRPR 552
            ||.|||.|:|::|.|...||||..|:||:|:.|    .|.....|..:...:|.. ::|...||
  Rat   426 FSSGKRMCVGEALARMELFLLLTTIVQNFNLKSFVATKDIDTTPLTNTFGCVPPS-YQLYFTPR 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spokNP_001104460.2 p450 52..549 CDD:299894 134/538 (25%)
LOC100361492XP_003749152.1 p450 30..483 CDD:278495 133/537 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45226
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X6
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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