DRSC/TRiP Functional Genomics Resources

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Protein Alignment spok and cyp2a6

DIOPT Version :10

Sequence 1:NP_001104460.2 Gene:spok / 5740359 FlyBaseID:FBgn0086917 Length:553 Species:Drosophila melanogaster
Sequence 2:NP_001120541.1 Gene:cyp2a6 / 100145695 XenbaseID:XB-GENE-5903934 Length:495 Species:Xenopus tropicalis


Alignment Length:563 Identity:144/563 - (25%)
Similarity:225/563 - (39%) Gaps:126/563 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 LLLKCKQKAFVVIGLLYQEK---KYQCFDQAPGPHPWPIIGNINLLGRFQYNPFYGFGTLTKKYG 85
            ||..|      ||.|||..|   |.:..:..|||..:|::||...:|..:...  .|..|:|.||
 Frog    10 LLSVC------VIILLYLVKWRGKSKSKNLPPGPTAYPLLGNFPQIGLREIPS--SFVQLSKTYG 66

  Fly    86 DIYSLSLGHTRCIVVNNVDLIKEVLNKNGKYFGGRPDFFRYHKLF--------GGDRNNSLALCD 142
            .:|:|.||..|.||:...|.:||.|......|..|........||        .|:|        
 Frog    67 PVYTLYLGGHRLIVLIGHDAVKEALIDQSDVFSDRGRLGISQVLFDEHGVIMSNGER-------- 123

  Fly   143 WSQLQQ----KRRNLARRHCSPRESSSYFSKMSEIGGLEVNQLLDQLTNISSGYPCDVKPLILAA 203
            |..:::    ..||......|..|...           |..:.|::........|.|...|:..|
 Frog   124 WKTMRRFTLTTLRNFGMGKRSVEERIQ-----------EEARSLEEAFRKKKDEPFDPVNLLGPA 177

  Fly   204 SANMFCQYMCSVRFNYSDKGFQKIIEYFDEIFWEINQGYSFDYIPWLVPFYCNHI----SRIVHW 264
            .:|:.|..:...||:|.|:.|..:::...|:...:|.  .|..:..:.|....||    ..|..:
 Frog   178 VSNIICSIIFGDRFDYEDEKFTTLLKCMRELINLLNS--LFGQLVNVFPNLSQHIPGPHQNIFTY 240

  Fly   265 SASIRKFILERIVNHRESNININEPDKDFTDALLKSLKEDKNVSRNT---------IIFMLEDFI 320
            ...|::|:.:...:|::: ::.|.| :||.|..|..::|:| ::.||         :||.|  |.
 Frog   241 FNKIKQFVKDEAKSHKDT-LDANCP-RDFIDCFLIRMEEEK-MNPNTEFHNDNLFAVIFDL--FF 300

  Fly   321 GGHSAVGNLVMLALAYIAKNPTIALHIRNEVDTVSAKGIRRICLYDMNVMPYTMASISEVLRYSS 385
            .|.......:..|.....|.|.:...:..|:|.|..:. |.....|...||||.|.|.||.|::.
 Frog   301 AGTETSSLTLRYAFLIFLKYPEVQEKVYKEIDQVIGQN-RYPSFEDKIKMPYTEAVIHEVQRFAD 364

  Fly   386 SPIVP----HVAMEDTVIKGFGVRKGTIVF-INNYVLNMSESFWNHPEQFDPERFLENNFTNNKE 445
              |||    |...:||..:|:.:.|||.|| :...||. ...::.:|:||||..||:.|      
 Frog   365 --IVPTGLEHKTSKDTTFRGYDIPKGTSVFPVLTSVLK-DPKYFKNPDQFDPGHFLDEN------ 420

  Fly   446 SGLKCDDNKRTEFIRKNDNDGSTKSKKYGKQNLNNKLLKKSIPQFLPFSVGKRTCIGQSLVRGFG 510
               .|        .:|||                         .|:|||.|||.|.|:.|.|...
 Frog   421 ---GC--------FKKND-------------------------AFMPFSAGKRMCAGEGLARMEL 449

  Fly   511 FLLLANIIQNYNVNSADFSKIKLEKSSIALPKKCFKLSLRPRT 553
            |:.|.:|:|.:.:..             .:|.:..|::.:|:|
 Frog   450 FIFLTSILQKFTLKP-------------TVPAETIKITPQPKT 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spokNP_001104460.2 CYP1_2-like 85..547 CDD:410710 120/491 (24%)
cyp2a6NP_001120541.1 cytochrome_P450 65..489 CDD:477761 124/500 (25%)

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