DRSC/TRiP Functional Genomics Resources

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Protein Alignment SLO2 and kcnma1b

DIOPT Version :9

Sequence 1:NP_001097259.2 Gene:SLO2 / 5740325 FlyBaseID:FBgn0261698 Length:1878 Species:Drosophila melanogaster
Sequence 2:XP_021336127.1 Gene:kcnma1b / 798583 ZFINID:ZDB-GENE-101209-2 Length:1107 Species:Danio rerio


Alignment Length:1585 Identity:302/1585 - (19%)
Similarity:467/1585 - (29%) Gaps:658/1585 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 IKNQRSSLRIRIADLF-LKLLSCVLYIIRVILDKNPTFITCYGCEVGNKTEFIISAKLTEEEFQE 178
            |..|..:.|:.:..:| |.:.:.|:|.|    |.:....:|                   |.|.:
Zfish    12 ISAQTLTGRVLVVLVFALSIGALVIYFI----DSSDPIESC-------------------EHFDK 53

  Fly   179 NPIINWDAILWVNRPTVLWVLQLLLAMVSLTQSLVLTYLGYK-----GNIWQQILSFHFILELVT 238
            |                 :.||:.:|.    ....|.|.|.:     ..:|       |.||:.:
Zfish    54 N-----------------FTLQIDMAF----NVFFLLYFGLRFIAANDKLW-------FWLEVNS 90

  Fly   239 TIPFALTIVHPPLRNLFIPIFLN-CWLAKRSLENMFNDLHRAMQKSQ-SALSQQLTILSAT---- 297
            .:.| .|:  ||   :|:.::|| .||..|.|        ||::..| |.:.|.|.||..:    
Zfish    91 VVDF-FTV--PP---VFVSVYLNRSWLGLRFL--------RALRLIQFSEILQFLNILKTSNSIK 141

  Fly   298 --LLCLVFTS----VCGIQH-----------FQRAGHRHLNLFQSTYYVVVTFSTVGYGDFVPDI 345
              .||.:|.|    ..|..|           ||.:  :.|:.::..|.::||.|||||||.....
Zfish   142 LVNLCSIFISTWLTAAGFIHLVENSGDPWENFQNS--QPLSYWECVYLLMVTMSTVGYGDVCAKT 204

  Fly   346 WPSQLYMVIMICVALIVLPTQFEQLAFTWMERQKLGGSYSSHRAQSEKHVVVCS-TTLHADTIMD 409
            ...:|:||..|...|.:..:...::......|:|.|||||:  ....||:|||. .||  :::.:
Zfish   205 TLGRLFMVFFILGGLAMFASYVPEIIELIGNRKKYGGSYSA--VNGRKHIVVCGHITL--ESVSN 265

  Fly   410 FLNEFYAHPLLQDFYVVL-----LSP-MELDTTM-RMILQVPIWAQRVIYIQGSCLKDGDLARAR 467
            ||.:| .|....|..|.:     :|| :||:... |...||.       :.|||.|...||||.:
Zfish   266 FLKDF-LHKDRDDVNVEIVFLHNISPNLELEALFKRHFTQVE-------FYQGSVLNPHDLARVK 322

  Fly   468 MNEAEACFILAARNYADKTAADEHTILRSWAVKDFAPNVPQYVQIFRPEHKLHV--------KFA 524
            :..|:||.|||.:..||..|.|...|:|..::|::.|.:....|:.:..:|.|:        |..
Zfish   323 IESADACLILANKYCADPDAEDASNIMRVISIKNYHPKIRIITQMLQYHNKAHLLNIPSWNWKEG 387

  Fly   525 EHVVCEDEFKYALLANNCTCPGASTLVTLLLHTSRGQEGQQSPEEWHRLYGKCSGNEIYHIVLGD 589
            :..:|..|.|...:|.:|...|.||::..|.  |.....:...:.|.:.|.:...||:|      
Zfish   388 DDAICLAELKLGFIAQSCLAQGLSTMLANLF--SMRSYIKIEEDTWQKYYLEGVANEMY------ 444

  Fly   590 SRFFGEYEGKSFTYASFHS-----HRKYGVALVGVRPAELPEFYEETILLNPGPRHIMKKDDTC- 648
                .||...:|...||.:     :.|..:.|:.:....  :..|.:.|:||| .|:..::.|. 
Zfish   445 ----TEYLSSAFVGLSFPTVCELCYVKLKLLLIAIEYKS--DQRESSTLINPG-NHVKMQEGTLG 502

  Fly   649 -YYMSITKEENSAFV---VNQNQTSDPTAAAKEGSGTGGGGGASSSASHHHTAATANPTTTITTT 709
             :..|..||...|..   ...:..:||....|.|                               
Zfish   503 FFIASDAKEVKRALFYCKACHDDITDPKRIKKCG------------------------------- 536

  Fly   710 VQATTTTISTTFTSSTLLSASTTTATINATSTAAAAPPPVPSVCVRVPHSPSYDSGGGTTGTTHL 774
                                                       |.|:.:|.|..:|         
Zfish   537 -------------------------------------------CKRMLYSKSNYNG--------- 549

  Fly   775 QPYPYPQSYPQPHPPMQTPDSGEFASLFVPSENPTAVIISDSRQNLKDTTVTQTAATITTTTLPP 839
                                       ::.|       |:|..|                   .|
Zfish   550 ---------------------------YIKS-------IADESQ-------------------CP 561

  Fly   840 PPQTMGSPSMAGGSGGCGGGGLGLGSAHSMGTSLSITPATLTTTGNHLDVPFANNPNLLSPDVLN 904
            .|....|.                                         ||.|..|    ..::|
Zfish   562 RPAVRSSA-----------------------------------------VPAARVP----VPLVN 581

  Fly   905 QRRGS-----RRPSILPVPDMFTSSSFSIAGNDDGEEGDESDDEIDDE-----------MPWRSP 953
            .|:||     ....:|..|........|:|.:   .|...|.:.:|||           :..|.|
Zfish   582 YRKGSTLSADHHKGLLLSPAASYLHRLSLASS---RELQRSREGVDDEGVRLHRACSLPVKHRHP 643

  Fly   954 SEKIACLGGHFPQSRTYSLIMSSSEDSYQRGCSFCSATASASAAAVAVAVAAAPAPAPAPAYPSD 1018
            |              |:||::...:.|            |.|                    |..
Zfish   644 S--------------THSLLVEEEQHS------------SLS--------------------PKK 662

  Fly  1019 SAGESGTNADSAAMPSE--EYLPQLRRRVMKKSYSCDSECRSVPGMGMGMAMGVGLGGGTLARLA 1081
            .....|........|..  .:.|.|....|      |...:.....||                 
Zfish   663 KQRNGGMRTSPTCSPKNLIRHDPLLEMETM------DENIKKYDSTGM----------------- 704

  Fly  1082 ARRRQLQRCSSCSCSTATTTTTPAVAATTAMAAGSGATAFTSSSSVETRRPVRPVWVYDYSCIVK 1146
                 ...|.|........|.:.|     ||...||....                         
Zfish   705 -----FHWCPSKDIERVLLTRSEA-----AMTVLSGHVVV------------------------- 734

  Fly  1147 GFPPVSPFIGVSPTLCYLLKEKKPLCCLQLAQVCEHCSYRNAKEYQWQNKTIILAADYASNGIYN 1211
                                                |.:.:.|.              |..|:.|
Zfish   735 ------------------------------------CIFGDVKS--------------ALIGLRN 749

  Fly  1212 FIIPLRA---HFRSKTSLNPIILLLERRPDVAFLDALSY----------FPLVYWMLGSIDCLDD 1263
            .::||||   |:.   .|.||:          |:.:|.|          ||.|..:.|:.....|
Zfish   750 LVMPLRASNFHYH---ELKPIV----------FVGSLEYLKREWETLHNFPKVSILPGTPLSRAD 801

  Fly  1264 LLRAGITLAESVVVVNKELSNSAEEDSLSDCNTIVAVQNMFK----------------FFP---- 1308
            |....|.|.:..|:::.. .|:.::.||.|...|:|..|:..                |.|    
Zfish   802 LRAVNINLCDMCVILSAN-QNNIDDASLQDKECILASLNIKSMQFDDSIGLLQANSQGFTPPGMD 865

  Fly  1309 ----------------------SIKSITELSQSSNMRFMQFRAHD--KYALHLSKMEKREKERGS 1349
                                  :|..||||...||::|:.....|  ...|:|::          
Zfish   866 RSSPENSPVHGLVRQASITTGANIPIITELVNDSNVQFLDQDDDDDPDTELYLTQ---------- 920

  Fly  1350 HISYMFRLPFAAGAVFSASMLDTLLYQAFVKDYVITFVRL------------LLGIDQAPGSGFL 1402
                    |||.|..|:.|:||:|:...:..|.::|.:|.            ||..:.|...|:.
Zfish   921 --------PFACGTAFAVSVLDSLMSATYFNDNILTLIRTLVTGGATPELEGLLAEENALRGGYS 977

  Fly  1403 TSMRITKDDMWIRT------------------YGRLYQKLCSTTCEIPIGIYRTQDTSNADTS-- 1447
            |...:...|. .|.                  ||.|:.|...|...:..||||.:|......|  
Zfish   978 TPQTLANRDR-CRVAQLALYDGPFADLGDGGCYGDLFCKALKTYNMLCFGIYRLRDAHLTAASLC 1041

  Fly  1448 ----HVSNSPVERWGPFSAFSRHCVRLRPSYDEETGTPDSTKDSTEMLRGVTYRPPGSATGGASS 1508
                .::|.|.|    |.......:.....:|...|...|..::                  .||
Zfish  1042 TKRYVITNPPYE----FDLVPTDLIFCLMQFDHNAGQSRSNLNT------------------QSS 1084

  Fly  1509 FRPQPQRQRSVNCLGGCSERKGSSY 1533
            |.|..:..||     .|:.|....|
Zfish  1085 FCPVRRASRS-----RCTPRDKQKY 1104

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SLO2NP_001097259.2 Ion_trans_2 297..363 CDD:285168 24/86 (28%)
BK_channel_a 524..619 CDD:281490 22/99 (22%)
kcnma1bXP_021336127.1 Ion_trans 21..238 CDD:306908 64/283 (23%)
NADB_Rossmann 252..365 CDD:328723 40/122 (33%)
BK_channel_a 387..475 CDD:308870 22/99 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170587085
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

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