DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SLO2 and kcnt2l

DIOPT Version :10

Sequence 1:NP_001097259.2 Gene:SLO2 / 5740325 FlyBaseID:FBgn0261698 Length:1878 Species:Drosophila melanogaster
Sequence 2:XP_012808571.1 Gene:kcnt2l / 779818 XenbaseID:XB-GENE-5993003 Length:1159 Species:Xenopus tropicalis


Alignment Length:1565 Identity:629/1565 - (40%)
Similarity:836/1565 - (53%) Gaps:463/1565 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 DISRSSMRLDERVRVEYYVNENTFKERLQLYFIKNQRSSLRIRIADLFLKLLSCVLYIIRVILDK 147
            |:.....:.|:||.||:|||||:|||||:|:||||||||||:|:.:..||||||:||||||:|| 
 Frog    18 DLLMGDWQQDDRVHVEFYVNENSFKERLKLFFIKNQRSSLRVRVFNCSLKLLSCLLYIIRVLLD- 81

  Fly   148 NPTFIT--CYGCEVGNKTEFIISAKLTEEEFQENPIINWDAILWVNRPTVLWVLQLLLAMVSLTQ 210
            :|....  |:.|              |::.:......:|..|:|||||..||.||:|:|::|..:
 Frog    82 DPRESRGGCWEC--------------TKQNYSAQQKFDWTPIIWVNRPLPLWGLQVLVALISFWE 132

  Fly   211 SLVLTYLGYKGNIWQQILSFHFILELVTTIPFALTIVHPPLRNLFIPIFLNCWLAKRSLENMFND 275
            :::|||||||||||:|:|...||||::.|:||.:||..|||||:|||:||||||||.:||||.||
 Frog   133 TMLLTYLGYKGNIWEQLLRIPFILEMLNTLPFFVTIFWPPLRNVFIPVFLNCWLAKHALENMIND 197

  Fly   276 LHRAMQKSQSALSQQLTILSATLLCLVFTSVCGIQHFQRAGHRHLNLFQSTYYVVVTFSTVGYGD 340
            ||||:|::.||:..|:.||..||:||:||.:|||||.:|||: :|.||.|.|:.:|||||||:||
 Frog   198 LHRAIQRTHSAMFNQVFILICTLICLMFTCICGIQHLERAGN-NLTLFDSLYFCIVTFSTVGFGD 261

  Fly   341 FVPDIWPSQLYMVIMICVALIVLPTQFEQLAFTWMERQKLGGSYSSHRAQSEKHVVVCSTTLHAD 405
            ..|.||||||.:||||||||||||.|||||.|.||||||.||:||.:|||:|||||:|.::|..|
 Frog   262 VTPKIWPSQLLVVIMICVALIVLPIQFEQLVFLWMERQKSGGNYSRYRAQTEKHVVLCVSSLKID 326

  Fly   406 TIMDFLNEFYAHPLLQDFYVVLLSPMELDTTMRMILQVPIWAQRVIYIQGSCLKDGDLARARMNE 470
            .:|||||||||||.|||.|||||.|.|:|..:|.:||:|:|:|||||:|||.|||.||.||::::
 Frog   327 LLMDFLNEFYAHPRLQDHYVVLLCPTEMDLPVRRVLQIPLWSQRVIYLQGSALKDQDLMRAKIDD 391

  Fly   471 AEACFILAARNYADKTAADEHTILRSWAVKDFAPNVPQYVQIFRPEHKLHVKFAEHVVCEDEFKY 535
            |||||||:.|...|:.|||..||||:|||||||||.|.||||.:||:|.|:|||:|||||:||||
 Frog   392 AEACFILSNRFERDRIAADHQTILRAWAVKDFAPNCPLYVQILKPENKFHIKFADHVVCEEEFKY 456

  Fly   536 ALLANNCTCPGASTLVTLLLHTSRGQEGQQSPEEWHRLYGKCSGNEIYHIVLGDSRFFGEYEGKS 600
            |:||.||.||..|||:|||:||||||:...||::|...|.:||.||:|||.|.:|:|||||||||
 Frog   457 AMLALNCVCPATSTLITLLIHTSRGQDSASSPDQWQNTYSRCSANEVYHIRLSESKFFGEYEGKS 521

  Fly   601 FTYASFHSHRKYGVALVGVRPAELPEFYEETILLNPGPRHIMKKDDTCYYMSITKEENSAFVVNQ 665
            |||:|||:|:||||.|:|||...     :.:|||||||.|||...|||:|::|:|||||||.:..
 Frog   522 FTYSSFHAHKKYGVCLIGVRRDN-----KTSILLNPGPCHIMSSTDTCFYINISKEENSAFSLKD 581

  Fly   666 NQTSDPTAAAKEGSGTGGGGGASSSASHHHTAATANPTTTITTTVQATTTTISTTFTSSTLLSAS 730
            |:.:..:...|                                          :|:...|.|   
 Frog   582 NEEAKKSGYPK------------------------------------------STYHGLTRL--- 601

  Fly   731 TTTATINATSTAAAAPPPVPSVCVRVPHSPSYDSGGGTTGTTHLQPYPYPQSYPQPHPPMQTPDS 795
                             ||.|:                                           
 Frog   602 -----------------PVHSI------------------------------------------- 606

  Fly   796 GEFASLFVPSENPTAVIISDSRQNLKDTTVTQTAATITTTTLPPPPQTMGSPSMAGGSGGCGGGG 860
                   :.|....|:.:..||                            ||....|        
 Frog   607 -------IASMGTVAMDLQGSR----------------------------SPESVDG-------- 628

  Fly   861 LGLGSAHSMGTSLSITPATLTTTGNHLDVPFANNPNLLSP--DVLNQRRGSRRPSILPVPDMFTS 923
                                               |:|||  |..:.|:.| ..::|.|.|..||
 Frog   629 -----------------------------------NMLSPPADGTHTRKHS-IDAVLDVVDGDTS 657

  Fly   924 SSFSIAGNDDGEEGDESDDEIDDEMPWRSPSEKIACLGGHFPQSRTYSLIMSSSEDSYQRGCSFC 988
            ::|.:..:...:|..:||:|:|                                           
 Frog   658 TNFDLLSDQSEDETSQSDEELD------------------------------------------- 679

  Fly   989 SATASASAAAVAVAVAAAPAPAPAPAYPSDSAGESGTNADSAAMPSEEYLPQLRRRVMKKSYSCD 1053
                                                                             
 Frog   680 ----------------------------------------------------------------- 679

  Fly  1054 SECRSVPGMGMGMAMGVGLGGGTLARLAARRRQLQRCSSCSCSTATTTTTPAVAATTAMAAGSGA 1118
                                                                             
 Frog   680 ----------------------------------------------------------------- 679

  Fly  1119 TAFTSSSSVETRRPVRPVWVYDYSCIVKGFPPVSPFIGVSPTLCYLLKEKKPLCCLQLAQVCEHC 1183
                  ||:.               :|||:|..:|:||.|||||:||::|.|.|||:|.:.|:|.
 Frog   680 ------SSIN---------------LVKGYPSNTPYIGSSPTLCHLLQQKNPYCCLRLDKSCQHY 723

  Fly  1184 SYRNAKEYQWQNKTIILAADYASNGIYNFIIPLRAHFRSKTSLNPIILLLERRPDVAFLDALSYF 1248
            .|.:|:.|.::|..:|::|::|.||:||||:||||::|.|..|:|||||||..|||.||:|:.:|
 Frog   724 PYEDARAYGFRNALVIVSAEHAGNGLYNFIVPLRAYYRGKKELSPIILLLENPPDVQFLEAICWF 788

  Fly  1249 PLVYWMLGSIDCLDDLLRAGITLAESVVVVNKELSNSAEEDSLSDCNTIVAVQNMFKFFPSIKSI 1313
            ||||:|:||||.|||:||.|::.|..:|||.:|.|..||||.::|..|||.||.:|:.||.:..|
 Frog   789 PLVYYMVGSIDNLDDMLRCGVSYAAHMVVVGEESSMIAEEDYMADARTIVNVQTLFRLFPGLNII 853

  Fly  1314 TELSQSSNMRFMQFRAHDKYALHLSKMEKREKERGSHISYMFRLPFAAGAVFSASMLDTLLYQAF 1378
            |||:..:|||||||:|.|||::.|||:||||:||||::.:|||||||||.|||.|||||||||:|
 Frog   854 TELTHPANMRFMQFKAKDKYSVVLSKLEKRERERGSNLVFMFRLPFAAGKVFSVSMLDTLLYQSF 918

  Fly  1379 VKDYVITFVRLLLGIDQAPGSGFLTSMRITKDDMWIRTYGRLYQKLCSTTCEIPIGIYRTQ-DTS 1442
            ||||:|:..|||||:|..||||||.::|:|::|:|||.||||||||||||.:||||||||: ...
 Frog   919 VKDYMISITRLLLGLDSMPGSGFLCALRVTEEDLWIRCYGRLYQKLCSTTGDIPIGIYRTETHLL 983

  Fly  1443 NADTSHVSNSPVE--------RWGPFSAFSRHCVRLRPSYDEETGTP----DSTKDSTE--MLRG 1493
            .|..|.||.| ||        |||                |...|.|    .::.|.:|  :|| 
 Frog   984 PASESQVSIS-VEDYEDTRETRWG----------------DPSQGRPLHRNSTSSDQSEHPLLR- 1030

  Fly  1494 VTYRPPGSATGGASSFRPQPQRQRSVNCLGGCSERKGSSYSINLADEARDNHAQQIERAEIANLV 1558
                            |...|..|.::..|.....|.:|..|:   :.|.:..::.||.|:..||
 Frog  1031 ----------------RKSMQWARRLSRKGARQPGKSASERIS---QQRMSLYRRSERQELNALV 1076

  Fly  1559 RSRMESLNLPTIDYD----DVSEKRNHLSYVIINPSCDLKLEEGDLIYLVRPSPFSAQKTFERHN 1619
            ::||:.|.|.|.:|.    |:.:..|.|||::||||.|.|||..|::||:||.|.    |.....
 Frog  1077 KTRMKHLGLSTAEYSMKQMDIMDTDNTLSYILINPSPDTKLELNDVVYLIRPDPL----TLVSMK 1137

  Fly  1620 SRRKS 1624
            ||:.|
 Frog  1138 SRKAS 1142

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SLO2NP_001097259.2 Ion_trans_2 <319..363 CDD:462301 30/43 (70%)
BK_channel_a 525..619 CDD:460947 62/93 (67%)
kcnt2lXP_012808571.1 Ion_trans <134..284 CDD:459842 98/150 (65%)
Ion_trans_2 220..286 CDD:462301 45/66 (68%)
BK_channel_a 446..540 CDD:460947 62/93 (67%)

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