DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SLO2 and kcnt2

DIOPT Version :9

Sequence 1:NP_001097259.2 Gene:SLO2 / 5740325 FlyBaseID:FBgn0261698 Length:1878 Species:Drosophila melanogaster
Sequence 2:XP_021324135.1 Gene:kcnt2 / 568327 ZFINID:ZDB-GENE-130530-783 Length:1130 Species:Danio rerio


Alignment Length:1555 Identity:546/1555 - (35%)
Similarity:770/1555 - (49%) Gaps:487/1555 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 DERVRVEYYVNENTFKERLQLYFIKNQRSSLRIRIADLFLKLLSCVLYIIRVILD-KNPTFITCY 155
            |.:.:||:.|.|::||||||.|.||||||||.:|:..|.||:|||:||:.||:.| |:.|..:.:
Zfish    25 DPKFQVEFLVKESSFKERLQWYLIKNQRSSLSVRVFYLSLKVLSCILYVSRVLTDCKHQTQCSSH 89

  Fly   156 GCEVGNKTEFIISAKLTEEEFQENPIINWDAILWVNRPTVLWVLQLLLAMVSLTQSLVLTYLGYK 220
            .   ||.|       |.|        |:|..::||:|..:||.:|:.:|::.|...::||||.|:
Zfish    90 H---GNYT-------LLE--------IDWAPVIWVDRNEILWAVQVSVAVICLFMRILLTYLRYR 136

  Fly   221 GNIWQQILSFHFILELVTTIPFALTIVHPPLRNLFIPIFLNCWLAKRSLENMFNDLHRAMQKSQS 285
            |||.||:|...|||||:.|:||.:.|.:...|.||:|:|||||||||:||:..||||||:.::||
Zfish   137 GNILQQVLQMAFILELIDTVPFVIGIFYQSFRKLFVPVFLNCWLAKRALESTVNDLHRAIHRTQS 201

  Fly   286 ALSQQLTILSATLLCLVFTSVCGIQHFQRAGHRHLNLFQSTYYVVVTFSTVGYGDFVPDIWPSQL 350
            |:..|:.:|.:|::||:||.:||::|.||||.: |.:|.|.|:.:|||||||:||.|||||||:|
Zfish   202 AMFNQVLMLISTIVCLIFTFICGVEHLQRAGTK-LTVFDSFYFCIVTFSTVGFGDVVPDIWPSKL 265

  Fly   351 YMVIMICVALIVLPTQFEQLAFTWMERQKLGGSYSSHRAQSEKHVVVCSTTLHADTIMDFLNEFY 415
            .:|.||.|.|:|||.|||:||:.||||||.||.||..||::|||||:|.:::..|.:||||||||
Zfish   266 LVVFMILVTLMVLPIQFEELAYLWMERQKSGGYYSRQRAETEKHVVLCVSSIKIDLLMDFLNEFY 330

  Fly   416 AHPLLQDFYVVLLSPMELDTTMRMILQVPIWAQRVIYIQGSCLKDGDLARARMNEAEACFILAAR 480
            |||.|::.||::|.|.|||..:|.:|::|:|:.||||:|||.|||.||.||:::.|||||||..|
Zfish   331 AHPKLEEHYVIILCPTELDAAVRSVLRIPMWSHRVIYLQGSALKDQDLVRAKLDYAEACFILTCR 395

  Fly   481 NYADKTAADEHTILRSWAVKDFAPNVPQYVQIFRPEHKLHVKFAEHVVCEDEFKYALLANNCTCP 545
            ..||:.|||..||||:||||||||....:|||.:||:|.|||||:|:|||:|||:|:||.||.||
Zfish   396 CVADRNAADYQTILRAWAVKDFAPGCTLFVQILKPENKFHVKFADHIVCEEEFKFAMLAMNCICP 460

  Fly   546 GASTLVTLLLHTSRGQEGQQSPEEWHRLYGKCSGNEIYHIVLGDSRFFGEYEGKSFTYASFHSHR 610
            ..||.:|||:|||:|.|||.|||:|||:||||||||:|.|||..|.||.||||.:|.||||:::.
Zfish   461 ATSTFITLLVHTSQGLEGQHSPEDWHRIYGKCSGNEVYSIVLNKSIFFSEYEGNNFAYASFNAYN 525

  Fly   611 KYGVALVGVRPAELPEFYEETILLNPGPRHIMKKDDTCYYMSITKEENSAFVVNQNQTSDPTAAA 675
            |||:.|:||.|.:     .::||||||.::.|...|||:|:|:||||||  .|.|.:..:     
Zfish   526 KYGICLIGVCPED-----TKSILLNPGAQYTMNAMDTCFYISLTKEENS--YVKQRECGN----- 578

  Fly   676 KEGSGTGGGGGASSSASHHHTAATANPTTTITTTVQATTTTISTTFTSSTLLSASTTTATINATS 740
                                                                             
Zfish   579 ----------------------------------------------------------------- 578

  Fly   741 TAAAAPPPVPSVCVRVPHSPSYDSGGGTTGTTHLQPYPYPQSYPQPHPPMQTPDSGEFASLFVPS 805
                                                                             
Zfish   579 ----------------------------------------------------------------- 578

  Fly   806 ENPTAVIISDSRQNLKDTTVTQTAATITTTTLPPPPQTMGSPSMAGGSGGCGGGGLGLGSAHSMG 870
                                       .:.|.||                             ||
Zfish   579 ---------------------------NSKTQPP-----------------------------MG 587

  Fly   871 TSLSITPATLTTTGNHLDVPFANNPNLLSPDVLNQRRGSRRPSILPVPDMFTSSSFSIAGNDDGE 935
            :::: .|.|:......:.:|.:..|:|.:....::|   |:|.|:||.::..|.||..:....|:
Zfish   588 SAIT-RPGTMAIDIQEISIPSSLEPSLSTGANTSER---RQPIIIPVLELPDSPSFQASKLLSGQ 648

  Fly   936 -----EGDESDDEIDDEMPWRSPSEKIACLGGHFPQSRTYSLIMSSSEDSYQRGCSFCSATASAS 995
                 .||||:|                   |:|                               
Zfish   649 SKSHINGDESND-------------------GYF------------------------------- 663

  Fly   996 AAAVAVAVAAAPAPAPAPAYPSDSAGESGTNADSAAMPSEEYLPQLRRRVMKKSYSCDSECRSVP 1060
                                                                             
Zfish   664 ----------------------------------------------------------------- 663

  Fly  1061 GMGMGMAMGVGLGGGTLARLAARRRQLQRCSSCSCSTATTTTTPAVAATTAMAAGSGATAFTSSS 1125
                                                                             
Zfish   664 ----------------------------------------------------------------- 663

  Fly  1126 SVETRRPVRPVWVYDYSCIVKGFPPVSPFIGVSPTLCYLLKEKKPLCCLQ----LAQVCEHCSYR 1186
                                .|:||..|:||.|..||:|.|:|.|.||:.    |::.|.|....
Zfish   664 --------------------IGYPPNLPYIGSSTILCHLRKKKMPTCCMHLEKFLSKTCNHKDDE 708

  Fly  1187 NAKEYQWQNKTIILAADYASNGIYNFIIPLRAHFRSKTSLNPIILLLERRPDVAFLDALSYFPLV 1251
            :||.|..::|.:|::.:.|.|.:||||:||||.:|.:..|.||:||||..||..||:.:|:||::
Zfish   709 DAKVYSLKSKLVIVSVETAGNSLYNFILPLRASYRPQNELWPIVLLLEHVPDEEFLETISWFPMI 773

  Fly  1252 YWMLGSID----------C---------LDDLLRAGITLAESVVVVNKELSNSAEEDSLSDCNTI 1297
            |::|||||          |         ||||||.|::.|.|:|||:||.:.:|:||.::|..||
Zfish   774 YYLLGSIDSTITVVLNYACNIFSAFPYSLDDLLRCGVSFAASMVVVDKESTMTAKEDYMADAKTI 838

  Fly  1298 VAVQNMFKFFPSIKSITELSQSSNMRFMQFRAHDKYALHLSKMEKREKERGSHISYMFRLPFAAG 1362
            |.||.:|:.|..:..||||:.|:|||||||...|.::|..||:.|:|:|:||::|::|.||||||
Zfish   839 VNVQTLFRLFSGLNIITELTHSANMRFMQFSTKDCHSLAFSKLAKKEREKGSNLSFIFHLPFAAG 903

  Fly  1363 AVFSASMLDTLLYQAFVKDYVITFVRLLLGIDQAPGSGFLTSMRITKDDMWIRTYGRLYQKLCST 1427
            .|||.|||||||||:|||||:||..|||||::..|.||||.:|.||::|:.|.|||||||:|.||
Zfish   904 RVFSISMLDTLLYQSFVKDYMITITRLLLGLETTPQSGFLCAMSITEEDLCIETYGRLYQRLSST 968

  Fly  1428 TCEIPIGIYRTQDTSNADTSHVSNSPVERWGPFSAFSRHCVRLRPSY--DEETGTPDSTKDSTEM 1490
            ..:||||||||:       |....||.                .|.:  .::....|...|..|.
Zfish   969 VGDIPIGIYRTK-------SQTVESPE----------------TPQFQMSDKASVFDEGGDLDEQ 1010

  Fly  1491 LRGVTYRPPGSATGGASSFRPQPQRQRSVNCLGGCSERKGSSYSINLADEARDNHAQQI---ERA 1552
            .:.:....|.      |..:.|..|:||:.   ..|...|..::...||....:....:   ||.
Zfish  1011 HQNLQCEIPD------SQLQTQSLRRRSMQ---WASSLLGPWHTEREADRLSQHRGVLLSCSERL 1066

  Fly  1553 EIANLVRSRMESLNLPTIDYDDVSEKRNHLSYVIINPSCDLKLEEGDLIYLVRPSPFSAQ 1612
            |:..||:.||::|.|.|:.:|:.:..:|..:|::||||.|.|||..|::|::|....|::
Zfish  1067 EVTELVKKRMKNLGLSTLGFDEQTNIKNSHAYILINPSSDTKLELNDIVYIIRKDTLSSK 1126

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SLO2NP_001097259.2 Ion_trans_2 297..363 CDD:285168 38/65 (58%)
BK_channel_a 524..619 CDD:281490 61/94 (65%)
kcnt2XP_021324135.1 Ion_trans <148..278 CDD:306908 73/130 (56%)
Ion_trans_2 <234..286 CDD:311712 32/52 (62%)
BK_channel_a 439..534 CDD:308870 61/94 (65%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170587083
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3193
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D143826at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.750

Return to query results.
Submit another query.