DRSC/TRiP Functional Genomics Resources

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Protein Alignment SLO2 and kcnt2a

DIOPT Version :10

Sequence 1:NP_001097259.2 Gene:SLO2 / 5740325 FlyBaseID:FBgn0261698 Length:1878 Species:Drosophila melanogaster
Sequence 2:XP_068069686.1 Gene:kcnt2a / 568327 ZFINID:ZDB-GENE-130530-783 Length:1111 Species:Danio rerio


Alignment Length:1536 Identity:545/1536 - (35%)
Similarity:769/1536 - (50%) Gaps:468/1536 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 DERVRVEYYVNENTFKERLQLYFIKNQRSSLRIRIADLFLKLLSCVLYIIRVILD-KNPTFITCY 155
            |.:.:||:.|.|::||||||.|.||||||||.:|:..|.||:|||:||:.||:.| |:.|..:.:
Zfish    25 DPKFQVEFLVKESSFKERLQWYLIKNQRSSLSVRVFYLSLKVLSCILYVSRVLTDCKHQTQCSSH 89

  Fly   156 GCEVGNKTEFIISAKLTEEEFQENPIINWDAILWVNRPTVLWVLQLLLAMVSLTQSLVLTYLGYK 220
            .   ||.|       |.|        |:|..::||:|..:||.:|:.:|::.|...::||||.|:
Zfish    90 H---GNYT-------LLE--------IDWAPVIWVDRNEILWAVQVSVAVICLFMRILLTYLRYR 136

  Fly   221 GNIWQQILSFHFILELVTTIPFALTIVHPPLRNLFIPIFLNCWLAKRSLENMFNDLHRAMQKSQS 285
            |||.||:|...|||||:.|:||.:.|.:...|.||:|:|||||||||:||:..||||||:.::||
Zfish   137 GNILQQVLQMAFILELIDTVPFVIGIFYQSFRKLFVPVFLNCWLAKRALESTVNDLHRAIHRTQS 201

  Fly   286 ALSQQLTILSATLLCLVFTSVCGIQHFQRAGHRHLNLFQSTYYVVVTFSTVGYGDFVPDIWPSQL 350
            |:..|:.:|.:|::||:||.:||::|.||||.: |.:|.|.|:.:|||||||:||.|||||||:|
Zfish   202 AMFNQVLMLISTIVCLIFTFICGVEHLQRAGTK-LTVFDSFYFCIVTFSTVGFGDVVPDIWPSKL 265

  Fly   351 YMVIMICVALIVLPTQFEQLAFTWMERQKLGGSYSSHRAQSEKHVVVCSTTLHADTIMDFLNEFY 415
            .:|.||.|.|:|||.|||:||:.||||||.||.||..||::|||||:|.:::..|.:||||||||
Zfish   266 LVVFMILVTLMVLPIQFEELAYLWMERQKSGGYYSRQRAETEKHVVLCVSSIKIDLLMDFLNEFY 330

  Fly   416 AHPLLQDFYVVLLSPMELDTTMRMILQVPIWAQRVIYIQGSCLKDGDLARARMNEAEACFILAAR 480
            |||.|::.||::|.|.|||..:|.:|::|:|:.||||:|||.|||.||.||:::.|||||||..|
Zfish   331 AHPKLEEHYVIILCPTELDAAVRSVLRIPMWSHRVIYLQGSALKDQDLVRAKLDYAEACFILTCR 395

  Fly   481 NYADKTAADEHTILRSWAVKDFAPNVPQYVQIFRPEHKLHVKFAEHVVCEDEFKYALLANNCTCP 545
            ..||:.|||..||||:||||||||....:|||.:||:|.|||||:|:|||:|||:|:||.||.||
Zfish   396 CVADRNAADYQTILRAWAVKDFAPGCTLFVQILKPENKFHVKFADHIVCEEEFKFAMLAMNCICP 460

  Fly   546 GASTLVTLLLHTSRGQEGQQSPEEWHRLYGKCSGNEIYHIVLGDSRFFGEYEGKSFTYASFHSHR 610
            ..||.:|||:|||:|.|||.|||:|||:||||||||:|.|||..|.||.||||.:|.||||:::.
Zfish   461 ATSTFITLLVHTSQGLEGQHSPEDWHRIYGKCSGNEVYSIVLNKSIFFSEYEGNNFAYASFNAYN 525

  Fly   611 KYGVALVGVRPAELPEFYEETILLNPGPRHIMKKDDTCYYMSITKEENSAFVVNQNQTSDPTAAA 675
            |||:.|:||.|.:     .::||||||.::.|...|||:|:|:||||||  .|.|.:..:     
Zfish   526 KYGICLIGVCPED-----TKSILLNPGAQYTMNAMDTCFYISLTKEENS--YVKQRECGN----- 578

  Fly   676 KEGSGTGGGGGASSSASHHHTAATANPTTTITTTVQATTTTISTTFTSSTLLSASTTTATINATS 740
                                                                             
Zfish   579 ----------------------------------------------------------------- 578

  Fly   741 TAAAAPPPVPSVCVRVPHSPSYDSGGGTTGTTHLQPYPYPQSYPQPHPPMQTPDSGEFASLFVPS 805
                                                                             
Zfish   579 ----------------------------------------------------------------- 578

  Fly   806 ENPTAVIISDSRQNLKDTTVTQTAATITTTTLPPPPQTMGSPSMAGGSGGCGGGGLGLGSAHSMG 870
                                       .:.|.||                             ||
Zfish   579 ---------------------------NSKTQPP-----------------------------MG 587

  Fly   871 TSLSITPATLTTTGNHLDVPFANNPNLLSPDVLNQRRGSRRPSILPVPDMFTSSSFSIAGNDDGE 935
            :::: .|.|:......:.:|.:..|:|.:....::|   |:|.|:||.::..|.||..:....|:
Zfish   588 SAIT-RPGTMAIDIQEISIPSSLEPSLSTGANTSER---RQPIIIPVLELPDSPSFQASKLLSGQ 648

  Fly   936 -----EGDESDDEIDDEMPWRSPSEKIACLGGHFPQSRTYSLIMSSSEDSYQRGCSFCSATASAS 995
                 .||||:|                   |:|                               
Zfish   649 SKSHINGDESND-------------------GYF------------------------------- 663

  Fly   996 AAAVAVAVAAAPAPAPAPAYPSDSAGESGTNADSAAMPSEEYLPQLRRRVMKKSYSCDSECRSVP 1060
                                                                             
Zfish   664 ----------------------------------------------------------------- 663

  Fly  1061 GMGMGMAMGVGLGGGTLARLAARRRQLQRCSSCSCSTATTTTTPAVAATTAMAAGSGATAFTSSS 1125
                                                                             
Zfish   664 ----------------------------------------------------------------- 663

  Fly  1126 SVETRRPVRPVWVYDYSCIVKGFPPVSPFIGVSPTLCYLLKEKKPLCCLQ----LAQVCEHCSYR 1186
                                .|:||..|:||.|..||:|.|:|.|.||:.    |::.|.|....
Zfish   664 --------------------IGYPPNLPYIGSSTILCHLRKKKMPTCCMHLEKFLSKTCNHKDDE 708

  Fly  1187 NAKEYQWQNKTIILAADYASNGIYNFIIPLRAHFRSKTSLNPIILLLERRPDVAFLDALSYFPLV 1251
            :||.|..::|.:|::.:.|.|.:||||:||||.:|.:..|.||:||||..||..||:.:|:||::
Zfish   709 DAKVYSLKSKLVIVSVETAGNSLYNFILPLRASYRPQNELWPIVLLLEHVPDEEFLETISWFPMI 773

  Fly  1252 YWMLGSIDCLDDLLRAGITLAESVVVVNKELSNSAEEDSLSDCNTIVAVQNMFKFFPSIKSITEL 1316
            |::|||||.||||||.|::.|.|:|||:||.:.:|:||.::|..|||.||.:|:.|..:..||||
Zfish   774 YYLLGSIDSLDDLLRCGVSFAASMVVVDKESTMTAKEDYMADAKTIVNVQTLFRLFSGLNIITEL 838

  Fly  1317 SQSSNMRFMQFRAHDKYALHLSKMEKREKERGSHISYMFRLPFAAGAVFSASMLDTLLYQAFVKD 1381
            :.|:|||||||...|.::|..||:.|:|:|:||::|::|.||||||.|||.|||||||||:||||
Zfish   839 THSANMRFMQFSTKDCHSLAFSKLAKKEREKGSNLSFIFHLPFAAGRVFSISMLDTLLYQSFVKD 903

  Fly  1382 YVITFVRLLLGIDQAPGSGFLTSMRITKDDMWIRTYGRLYQKLCSTTCEIPIGIYRTQDTSNADT 1446
            |:||..|||||::..|.||||.:|.||::|:.|.|||||||:|.||..:||||||||:       
Zfish   904 YMITITRLLLGLETTPQSGFLCAMSITEEDLCIETYGRLYQRLSSTVGDIPIGIYRTK------- 961

  Fly  1447 SHVSNSPVERWGPFSAFSRHCVRLRPSY--DEETGTPDSTKDSTEMLRGVTYRPPGSATGGASSF 1509
            |....||.                .|.:  .::....|...|..|..:.:....|.      |..
Zfish   962 SQTVESPE----------------TPQFQMSDKASVFDEGGDLDEQHQNLQCEIPD------SQL 1004

  Fly  1510 RPQPQRQRSVNCLGGCSERKGSSYSINLADEARDNHAQQI---ERAEIANLVRSRMESLNLPTID 1571
            :.|..|:||:.   ..|...|..::...||....:....:   ||.|:..||:.||::|.|.|:.
Zfish  1005 QTQSLRRRSMQ---WASSLLGPWHTEREADRLSQHRGVLLSCSERLEVTELVKKRMKNLGLSTLG 1066

  Fly  1572 YDDVSEKRNHLSYVIINPSCDLKLEEGDLIYLVRPSPFSAQ 1612
            :|:.:..:|..:|::||||.|.|||..|::|::|....|::
Zfish  1067 FDEQTNIKNSHAYILINPSSDTKLELNDIVYIIRKDTLSSK 1107

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SLO2NP_001097259.2 Ion_trans_2 <319..363 CDD:462301 26/43 (60%)
BK_channel_a 525..619 CDD:460947 60/93 (65%)
kcnt2aXP_068069686.1 Ion_trans <148..278 CDD:459842 73/130 (56%)
Ion_trans_2 214..286 CDD:462301 43/72 (60%)
BK_channel_a 440..534 CDD:460947 60/93 (65%)

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