DRSC/TRiP Functional Genomics Resources

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Protein Alignment SLO2 and kcnt1a

DIOPT Version :9

Sequence 1:NP_001097259.2 Gene:SLO2 / 5740325 FlyBaseID:FBgn0261698 Length:1878 Species:Drosophila melanogaster
Sequence 2:XP_009293403.1 Gene:kcnt1a / 100004419 ZFINID:ZDB-GENE-091231-1 Length:1173 Species:Danio rerio


Alignment Length:1588 Identity:631/1588 - (39%)
Similarity:846/1588 - (53%) Gaps:489/1588 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 QRPRSMSVWSDISRSSMRLD-------ERVRVEYYVNENTFKERLQLYFIKNQRSSLRIRIADLF 130
            ::..::..|.:.:..:.|||       :||.||:||:||||||||:|:|||||||||||||.:..
Zfish     2 EQKNAVPSWVNPALVNWRLDSFGSDAGQRVHVEFYVDENTFKERLKLFFIKNQRSSLRIRIFNFC 66

  Fly   131 LKLLSCVLYIIRVILDKNPTFI--TCYGCEVGNKTEFIISAKLTEEEFQENPIINWDAILWVNRP 193
            ||||:||||||||:.| ||..:  ||..|...|.                   |||:.|.||:|.
Zfish    67 LKLLTCVLYIIRVMTD-NPAQLRHTCVNCSSQND-------------------INWELIFWVDRK 111

  Fly   194 TVLWVLQLLLAMVSLTQSLVLTYLGYKGNIWQQILSFHFILELVTTIPFALTIVHPPLRNLFIPI 258
            ..:|.:|:::|.:|..::::||||.||||:|:||....|:||::.|:||.:||..|||||||||:
Zfish   112 VPVWAIQVIVASISFMEAMLLTYLSYKGNLWEQIFQVSFLLEMLNTVPFIITIFWPPLRNLFIPV 176

  Fly   259 FLNCWLAKRSLENMFNDLHRAMQKSQSALSQQLTILSATLLCLVFTSVCGIQHFQRAGHRHLNLF 323
            ||||||||.:||:|.||||||:|::.||:..|:.||..||||||||..|||||.:|||.:.|:||
Zfish   177 FLNCWLAKCALESMINDLHRAIQRTHSAMFNQVLILICTLLCLVFTGTCGIQHLERAGKKSLSLF 241

  Fly   324 QSTYYVVVTFSTVGYGDFVPDIWPSQLYMVIMICVALIVLPTQFEQLAFTWMERQKLGGSYSSHR 388
            .:.|:.:|||||||:||..|.||||||.:|:||||||:|||.|||:|.:.||||||.||:||.||
Zfish   242 NALYFCIVTFSTVGFGDVTPQIWPSQLLVVVMICVALVVLPLQFEELIYLWMERQKSGGNYSRHR 306

  Fly   389 AQSEKHVVVCSTTLHADTIMDFLNEFYAHPLLQDFYVVLLSPMELDTTMRMILQVPIWAQRVIYI 453
            ||:|:|||:|.:||..|.:|||||||||||..||:|||:|.|.|:|..:|.|||:|:|:|||||:
Zfish   307 AQTERHVVLCVSTLKIDLLMDFLNEFYAHPHTQDYYVVILCPCEVDVQVRRILQIPLWSQRVIYL 371

  Fly   454 QGSCLKDGDLARARMNEAEACFILAARNYADKTAADEHTILRSWAVKDFAPNVPQYVQIFRPEHK 518
            |||.||:.||.||:|::|||||||::||.||:.|||..||||:|||||||||.|.||||.:||:|
Zfish   372 QGSALKNQDLLRAKMDDAEACFILSSRNEADRMAADHQTILRAWAVKDFAPNCPLYVQILKPENK 436

  Fly   519 LHVKFAEHVVCEDEFKYALLANNCTCPGASTLVTLLLHTSRGQEGQQSPEEWHRLYGKCSGNEIY 583
            .|||||:|||||:|||||:||.||.||..|||:|||:|||||||||||||:|.|:||:|||||:|
Zfish   437 FHVKFADHVVCEEEFKYAMLALNCLCPATSTLITLLVHTSRGQEGQQSPEQWQRMYGRCSGNEVY 501

  Fly   584 HIVLGDSRFFGEYEGKSFTYASFHSHRKYGVALVGVRPAELPEFYEETILLNPGPRHIMKKDDTC 648
            ||.||||.||.||..||||||:||:|:||||.::||:..:     .::|||||||||||...|||
Zfish   502 HIRLGDSMFFREYNSKSFTYAAFHAHKKYGVCMIGVKRED-----NKSILLNPGPRHIMSASDTC 561

  Fly   649 YYMSITKEENSAFVVNQNQTSDPTAAAKEGSGTGGGGGASSSASHHHTAATANPTTTITTTVQAT 713
            ||::|||||||||:..|          :|..|.|          ..|.....:|:.....::.|:
Zfish   562 YYINITKEENSAFIFRQ----------EEDQGKG----------RSHCDFLNSPSGLPVHSIIAS 606

  Fly   714 TTTISTTFTSSTLLSASTTTATINATSTAAAAPPPVPSVCVRVPHSPSYDSGGGTTGTTHLQPYP 778
            ..|::..|.:::                                                     
Zfish   607 MGTVAMDFQNTS----------------------------------------------------- 618

  Fly   779 YPQSYPQPHPPMQTPDSGEFASLFVPSENPTAVIISDSRQNLKDTTVTQTAATITTTTLPPPPQT 843
                                     |:|:           .||               |.||   
Zfish   619 -------------------------PTES-----------GLK---------------LAPP--- 629

  Fly   844 MGSPSMAGGSGGCGGGGLGLGSAHSMGTSLSITPATLTTTGNHLDVPFANNPNLLSPDVLNQRRG 908
                                                   |.|.|                    |
Zfish   630 ---------------------------------------TENEL--------------------G 635

  Fly   909 SRRPSILPVPDMFTSSSFSIAGNDDGEEGDESDDEIDDEMPWRSPSEKIACLGGHFPQSRTYSLI 973
            ||||||.||.::..|:|.                              :.|           .|:
Zfish   636 SRRPSIAPVLEIADSTSL------------------------------LPC-----------DLL 659

  Fly   974 MSSSEDSYQRGCSFCSATASASAAAVAVAVAAAPAPAPAPAYPSDSAGESGTNADSAAMPSEEYL 1038
            ...||                                       |.||.|  |.|          
Zfish   660 SDQSE---------------------------------------DEAGHS--NED---------- 673

  Fly  1039 PQLRRRVMKKSYSCDSECRSVPGMGMGMAMGVGLGGGTLARLAARRRQLQRCSSCSCSTATTTTT 1103
                                                                             
Zfish   674 ----------------------------------------------------------------- 673

  Fly  1104 PAVAATTAMAAGSGATAFTSSSSVETRRPVRPVWVYDYSCIVKGFPPVSPFIGVSPTLCYLLKEK 1168
              :.||                              |:   |||:||.||:||.|||||:||.:|
Zfish   674 --ITAT------------------------------DF---VKGYPPNSPYIGSSPTLCHLLPQK 703

  Fly  1169 KPLCCLQLAQVCEHCSYRNAKEYQWQNKTIILAADYASNGIYNFIIPLRAHFRSKTSLNPIILLL 1233
            .|.|||:|.|.|||.|:.:||.|.::||.||::|:.|.||:||||:||||::|.:..||||:|||
Zfish   704 APFCCLRLDQSCEHVSFEDAKAYGFKNKLIIVSAETAGNGLYNFIVPLRAYYRPRRELNPIVLLL 768

  Fly  1234 ERRPDVAFLDALSYFPLVYWMLGSIDCLDDLLRAGITLAESVVVVNKELSNSAEEDSLSDCNTIV 1298
            :..||..||:|:|.||:||:|.|:||.||.||:.|:..|:::|||:||.:.|||||.::|..|||
Zfish   769 DNLPDDHFLEAISCFPMVYYMGGTIDNLDSLLQCGVLYADNLVVVDKESTMSAEEDYMADAKTIV 833

  Fly  1299 AVQNMFKFFPSIKSITELSQSSNMRFMQFRAHDKYALHLSKMEK--------------REKERGS 1349
            .||.||:.|||:..||||:..||||||||||.|.|:|.|||:||              :|:::||
Zfish   834 NVQTMFRLFPSLSIITELTHPSNMRFMQFRAKDCYSLALSKLEKFCNWNIAKCVFDQQKERDKGS 898

  Fly  1350 HISYMFRLPFAAGAVFSASMLDTLLYQAFVKDYVITFVRLLLGIDQAPGSGFLTSMRITKDDMWI 1414
            ::::|||||||||.|||.|||||||||.|||||:|...|||||:|..||||:|.:|.|.:.|:||
Zfish   899 NLAFMFRLPFAAGRVFSISMLDTLLYQCFVKDYMIPIARLLLGLDTTPGSGYLCAMHICEADLWI 963

  Fly  1415 RTYGRLYQKLCSTTCEIPIGIYRTQDTSNADTSHVSNSPVERWGPFSAFSRHCVRLRPSYDEETG 1479
            ||||||:||.||::.|||||||||:          |::|.|            ::...|.|....
Zfish   964 RTYGRLFQKFCSSSSEIPIGIYRTE----------SHAPPE------------LQSSVSIDGLND 1006

  Fly  1480 TPDSTKDSTEMLRGVTYRPPGSATGGASSFRPQPQRQRSVNCLGGCSERKGSSYSINLADEARDN 1544
            |.:..::|..:.|        |::....|..|. .|::|::.     .|:.|..|:..:|.:..:
Zfish  1007 TREKGEESKILTR--------SSSSSDQSDHPL-LRKKSMHW-----TRRLSRRSVKRSDSSLSS 1057

  Fly  1545 HAQQI------ERAEIANLVRSRMESLNLPTIDY---------------------DDVSEKRNHL 1582
            ..|::      ||.|:..|||:||:.|.|.|..|                     |::::::|.:
Zfish  1058 IQQRLGVLRRSEREELTELVRNRMQHLGLHTGGYKDVTNLTASDVMNRVNLGYLQDELNDQQNSI 1122

  Fly  1583 SYVIINPSCDLKLEEGDLIYLVRPSPFS 1610
            |||:|||:.|..|:..|:::|:||.|.:
Zfish  1123 SYVLINPAPDTLLQLNDVVFLIRPDPLA 1150

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SLO2NP_001097259.2 Ion_trans_2 297..363 CDD:285168 43/65 (66%)
BK_channel_a 524..619 CDD:281490 69/94 (73%)
kcnt1aXP_009293403.1 Ion_trans_2 <239..289 CDD:285168 32/49 (65%)
BK_channel_a 442..537 CDD:281490 69/94 (73%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170587082
Domainoid 1 1.000 482 1.000 Domainoid score I394
eggNOG 1 0.900 - - E1_KOG3193
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H11055
Inparanoid 1 1.050 1109 1.000 Inparanoid score I222
OMA 1 1.010 - - QHG48024
OrthoDB 1 1.010 - - D143826at33208
OrthoFinder 1 1.000 - - FOG0002662
OrthoInspector 1 1.000 - - otm24770
orthoMCL 1 0.900 - - OOG6_103731
Panther 1 1.100 - - O PTHR10027
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1773
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.770

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