DRSC/TRiP Functional Genomics Resources

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Protein Alignment smal and DDR1

DIOPT Version :9

Sequence 1:NP_723165.2 Gene:smal / 5740323 FlyBaseID:FBgn0085409 Length:939 Species:Drosophila melanogaster
Sequence 2:XP_011513184.1 Gene:DDR1 / 780 HGNCID:2730 Length:937 Species:Homo sapiens


Alignment Length:716 Identity:197/716 - (27%)
Similarity:297/716 - (41%) Gaps:191/716 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 LWTLVIASGCLMLNAPTTMAFDIATCNVPLGMESLLITDAQITASSAHDMAFVGPQHARLKTDND 117
            |..|::|||    :|.....||.|.|...|||:...|.|:.|:|||:...: ...:|:||::.:.
Human    28 LLLLLVASG----DADMKGHFDPAKCRYALGMQDRTIPDSDISASSSWSDS-TAARHSRLESSDG 87

  Fly   118 GGAWCPKHMVSNALKEYLQVDLLQTHVITAIRTQGRYGKGQGQEYTEAYVLEYWRPGFDKWQRWK 182
            .|||||...|....:|||||||.:.|::..:.||||:..|.|:|::.:|.|.|.|.| .:|..||
Human    88 DGAWCPAGSVFPKEEEYLQVDLQRLHLVALVGTQGRHAGGLGKEFSRSYRLRYSRDG-RRWMGWK 151

  Fly   183 NIQGKEILPGNINTYSEVENALQPIIFASKIRIYPYGQYDRTVCLRAEIVGCPWEEGIVSYSIPK 247
            :..|:|::.||.:....|...|.|.:.|..:|.||......:||||.|:.||.|.:|::||:.|.
Human   152 DRWGQEVISGNEDPEGVVLKDLGPPMVARLVRFYPRADRVMSVCLRVELYGCLWRDGLLSYTAPV 216

  Fly   248 G--VQRGMEVDLSDKTYDGNEQGDRYVDGLGQLVDGQKGKDNFRTDIH-GFGKGYEWIGWRNDTP 309
            |  :.....|.|:|.||||:..|.....|||||.||..|.|:||.... ....||:::||.|.: 
Human   217 GQTMYLSEAVYLNDSTYDGHTVGGLQYGGLGQLADGVVGLDDFRKSQELRVWPGYDYVGWSNHS- 280

  Fly   310 GLLGKPVEIVFEFDTVRNFSAIVLHTNNMFTKDVQVFVHAKVFFSIG-GRYFSGEPVQFSYMPDT 373
             .....||:.||||.:|.|.|:.:|.|||.|...::....:..|..| ...:.|||::.:...:.
Human   281 -FSSGYVEMEFEFDRLRAFQAMQVHCNNMHTLGARLPGGVECRFRRGPAMAWEGEPMRHNLGGNL 344

  Fly   374 IMDHARDVTIKLHHRVGKYLKINLYFAVKWIMLSEISFI------SVPAMG-------------- 418
            ....||.|::.|..||.::|:....||..|::.||||||      |.||:|              
Human   345 GDPRARAVSVPLGGRVARFLQCRFLFAGPWLLFSEISFISDVVNNSSPALGGTFPPAPWWPPGPP 409

  Fly   419 --NFTD-EQEQRSNSPSQAQDVHDETNGSEYQANRNKPNGVGGSAGGLGEGVAAAGGDIVGNNKY 480
              ||:. |.|.|...|                                   ||.|.|        
Human   410 PTNFSSLELEPRGQQP-----------------------------------VAKAEG-------- 431

  Fly   481 NNGPQLIAPRPIDQEPNDANFIGVVIVVLTTIIILLVAIILF------IVSRTKRARGSNVLDAF 539
                   :|..|        .||.::.:: .:::|::|::|:      ::|:.:|    .||:. 
Human   432 -------SPTAI--------LIGCLVAII-LLLLLIIALMLWRLHWRRLLSKAER----RVLEE- 475

  Fly   540 QYSFNPNTLGGNV--------------DKHRPNGNSIKANVDDNDSIGKNSLYHEPFNVNMYTCG 590
            :.:.:.:..|..:              .:.||.||                   .|.:.   .|.
Human   476 ELTVHLSVPGDTILINNRPGPREPPPYQEPRPRGN-------------------PPHSA---PCV 518

  Fly   591 VNGYAAV--NDLQCNMTPDYTDVPEG------GYAVP-----HMQDYMPSSKMGGGAPGGGGYVN 642
            .||.|.:  |.....:...|...|.|      .:|.|     :..|||...|  .|||       
Human   519 PNGSALLLSNPAYRLLLATYARPPRGPGPPTPAWAKPTNTQAYSGDYMEPEK--PGAP------- 574

  Fly   643 VRRTPPPPLSSIFPR-------------------PPTVPP------PPMEKYYATTAIFKPLKGP 682
              ..||||.:|: |.                   .|.:||      ||...:..:...||...|.
Human   575 --LLPPPPQNSV-PHYAEADIVTLQGVTGGNTYAVPALPPGAVGDGPPRVDFPRSRLRFKEKLGE 636

  Fly   683 G 683
            |
Human   637 G 637

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
smalNP_723165.2 FA58C 78..234 CDD:214572 58/155 (37%)
FA58C 81..233 CDD:238014 57/151 (38%)
DDR1XP_011513184.1 FA58C 48..203 CDD:214572 58/156 (37%)
FA58C 78..202 CDD:238014 48/124 (39%)
PTKc_DDR1 622..931 CDD:133227 4/16 (25%)
STYKc 628..929 CDD:214568 4/10 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 98 1.000 Domainoid score I7173
eggNOG 1 0.900 - - E1_KOG1094
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 529 1.000 Inparanoid score I1223
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D122892at33208
OrthoFinder 1 1.000 - - FOG0001292
OrthoInspector 1 1.000 - - mtm8570
orthoMCL 1 0.900 - - OOG6_103661
Panther 1 1.100 - - O PTHR24416
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X998
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
109.870

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