DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment smal and ddr2a

DIOPT Version :10

Sequence 1:NP_723165.2 Gene:smal / 5740323 FlyBaseID:FBgn0085409 Length:939 Species:Drosophila melanogaster
Sequence 2:XP_005166320.1 Gene:ddr2a / 556380 ZFINID:ZDB-GENE-090316-2 Length:868 Species:Danio rerio


Alignment Length:630 Identity:185/630 - (29%)
Similarity:277/630 - (43%) Gaps:112/630 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 PRPPCRAPRWTLCLWTLVIASGCLMLNAPTTMAFDIATCNVPLGMESLLITDAQITASSAHDMAF 104
            |.|......|.:....|::    |.|:.......:...|..||||....|.|..|:|||....: 
Zfish     4 PSPTEMKQLWKMHFPLLIL----LYLSGAVQSQVNPGVCRSPLGMSRGQILDEDISASSQWSES- 63

  Fly   105 VGPQHARLKTDNDGGAWCPKHMVS-NALKEYLQVDLLQTHVITAIRTQGRYGKGQGQEYTEAYVL 168
            ...::.||..:...|||||:.... ..:||:||:||...|.||.:.||||:..|.|.|:.:.|.:
Zfish    64 TAAKYGRLDCEEGDGAWCPEIPAEPENMKEFLQIDLRSLHFITLVGTQGRHAGGIGNEFAQTYKI 128

  Fly   169 EYWRPGFDKWQRWKNIQGKEILPGNINTYSEVENALQPIIFASKIRIYPYGQYDRTVCLRAEIVG 233
            :|.|.| .:|..|:|.||||::.||.|.|..|...|:|.|.|..:|..|...:...||:|.|:.|
Zfish   129 KYSRDG-SRWISWRNRQGKEVIEGNRNAYDIVLKDLEPPIIARFVRFMPVIDHSMNVCMRVELYG 192

  Fly   234 CPWEEGIVSYSIPKGVQ---RGMEVDLSDKTYDGNEQGDRYVDGLGQLVDGQKGKDNFR-TDIHG 294
            |.|.:|:|||:.|.|.|   .|..:.|:|..||| .......:|||||.||..|.|:|. :.::.
Zfish   193 CEWLDGLVSYNSPLGQQMSLNGQHIYLNDSVYDG-AMSYSMTEGLGQLTDGMCGLDDFTLSHVYN 256

  Fly   295 FGKGYEWIGWRNDTPGLLGKPVEIVFEFDTVRNFSAIVLHTNNMFTKDVQVFVHAKVFFSIGGRY 359
            ...||:::||.|::  .....|||:||||..|||:.:.:|.||||::.|:.|  .||..     |
Zfish   257 VWPGYDYVGWTNES--FPNGYVEIMFEFDRTRNFTTMKVHCNNMFSRRVKTF--QKVVC-----Y 312

  Fly   360 FSGE------PVQFSYMPDTIMDHARDVTIKLHHRVGKYLKINLYFAVKWIMLSEISFISVPAMG 418
            |..|      ||.||.:.|.:...||.||:.|::.:...:|...||:..|:|.|||:|.|..||.
Zfish   313 FRSELDWEATPVSFSPVMDDVNPSARFVTVSLYNHMASAIKCQYYFSDIWMMFSEITFQSDTAMY 377

  Fly   419 NFTDEQEQRSNSPSQAQDVHDETNGSEYQANRNKPNGVGGSAGGLGEGVAAAGGDIVGNNKYNNG 483
            | |.....|::.|...|...|.|:                                         
Zfish   378 N-TTLTPPRTDPPLTNQPGDDPTH----------------------------------------- 400

  Fly   484 PQLIAPRPIDQEPNDANFIGVVIVVLTTIIILLVAIILFIVSR-------TKRAR--------GS 533
                       :.:|:| ..::|..|..||.:|||||:.|:.|       .|.:|        .|
Zfish   401 -----------KVDDSN-TRILIGCLVAIIFILVAIIVIILWRQVWQKMLEKVSRRMLDDELTAS 453

  Fly   534 NVLDAFQYSFNPNTLGGNVDKHRPNGNSIKANVDDNDSIGKNSLYHEPFNV--NMYTCGVNGYAA 596
            ..:.:..:::|.|....:|    |:.....:..:....:|.:  |.||..:  .:..........
Zfish   454 LSIQSETFTYNNNNSPSSV----PSEQESSSTYERIFPLGPD--YQEPSRLVRKLPEFSQTSEDT 512

  Fly   597 VNDLQCNMTPDYTDVPEGGYAVPHMQDYMPSSKMG-GGAPGGGGY 640
            .:.:..:.||. .:|.||   |||   |..:..:. .|..||..|
Zfish   513 ASTITASKTPS-VNVQEG---VPH---YAEADIVNLQGVTGGNTY 550

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
smalNP_723165.2 FA58C 81..233 CDD:238014 59/152 (39%)
ddr2aXP_005166320.1 FA58C 40..192 CDD:238014 59/153 (39%)
Protein Kinases, catalytic domain 569..865 CDD:473864
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.