DRSC/TRiP Functional Genomics Resources

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Protein Alignment smal and Nrk

DIOPT Version :9

Sequence 1:NP_723165.2 Gene:smal / 5740323 FlyBaseID:FBgn0085409 Length:939 Species:Drosophila melanogaster
Sequence 2:NP_477255.1 Gene:Nrk / 36445 FlyBaseID:FBgn0020391 Length:724 Species:Drosophila melanogaster


Alignment Length:73 Identity:22/73 - (30%)
Similarity:28/73 - (38%) Gaps:14/73 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   858 GVGLVPVPVTLPVDEV----VGVHLKAGSEAGAATGEASGSVTRQMVESGSSGSGKDGAKCGNDN 918
            |:|.|.: |||.:..:    :..|......|||||.|.|.|:         .|.|..|.......
  Fly   328 GIGFVAI-VTLHLMILLVYKLSKHKDYSQPAGAATAECSVSM---------RGGGDCGGNLNTSR 382

  Fly   919 ELGGGVAN 926
            |..||..|
  Fly   383 ETLGGNGN 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
smalNP_723165.2 FA58C 78..234 CDD:214572
FA58C 81..233 CDD:238014
NrkNP_477255.1 CRD_FZ 67..212 CDD:295308
KR 217..299 CDD:214527
PTKc_Musk 435..713 CDD:133181
Pkinase_Tyr 441..707 CDD:285015
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24416
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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