DRSC/TRiP Functional Genomics Resources

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Protein Alignment smal and Ddr

DIOPT Version :10

Sequence 1:NP_723165.2 Gene:smal / 5740323 FlyBaseID:FBgn0085409 Length:939 Species:Drosophila melanogaster
Sequence 2:NP_001014474.3 Gene:Ddr / 3346209 FlyBaseID:FBgn0053531 Length:1054 Species:Drosophila melanogaster


Alignment Length:770 Identity:410/770 - (53%)
Similarity:503/770 - (65%) Gaps:130/770 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 SMFSR-QCLSHLTRSPPTTTPTAAAP--------------RPP-------CRAPRW------TLC 52
            |::|| :|           :||...|              ||.       ||..|.      |||
  Fly    11 SIYSRSEC-----------SPTIGVPALVESQGGEGHESRRPATNYLKSYCRIKRHGVNNSKTLC 64

  Fly    53 LWTLVIASGCLMLN---------APTTMA----------FDIATCNVPLGMESLLITDAQITASS 98
            ..||.:   .|:.|         .|.|.|          ..|.||...|||||..|.|.||||||
  Fly    65 WLTLTL---ILLANRFGMGTAVGTPETPAAVGSNGLLAEMPIGTCKQALGMESGAIADFQITASS 126

  Fly    99 AHDMAFVGPQHARLKTDNDGGAWCPKHMVSNALKEYLQVDLLQTHVITAIRTQGRYGKGQGQEYT 163
            ||||..|||||||||.||:|||||||||||..|.||||||||..|:::|||||||:|||||||||
  Fly   127 AHDMGNVGPQHARLKIDNNGGAWCPKHMVSRGLTEYLQVDLLGVHLVSAIRTQGRFGKGQGQEYT 191

  Fly   164 EAYVLEYWRPGFDKWQRWKNIQGKEILPGNINTYSEVENALQPIIFASKIRIYPYGQYDRTVCLR 228
            ||||:||||||..||.||:::||||:|||||||||||||.|||.:||||:|:|||.|||||||||
  Fly   192 EAYVIEYWRPGLKKWIRWRSLQGKEVLPGNINTYSEVENVLQPSVFASKVRLYPYSQYDRTVCLR 256

  Fly   229 AEIVGCPWEEGIVSYSIPKGVQRGMEVDLSDKTYDGNEQGDRYVDGLGQLVDGQKGKDNFRTDIH 293
            ||||||.|||||||||||||:||||::|||||||||.|:||.||:|||||||||:||||||.||:
  Fly   257 AEIVGCAWEEGIVSYSIPKGMQRGMDIDLSDKTYDGYEEGDHYVNGLGQLVDGQRGKDNFRADIN 321

  Fly   294 GFGKGYEWIGWRNDTPGLLGKPVEIVFEFDTVRNFSAIVLHTNNMFTKDVQVFVHAKVFFSIGGR 358
            |.|||||||||||||  |||:||||:|||:||||.||:::||||||:||||||||||||||||||
  Fly   322 GLGKGYEWIGWRNDT--LLGRPVEIIFEFETVRNLSAVIIHTNNMFSKDVQVFVHAKVFFSIGGR 384

  Fly   359 YFSGEPVQFSYMPDTIMDHARDVTIKLHHRVGKYLKINLYFAVKWIMLSEISFISVPAMGNFTDE 423
            :|||||||||||||.::|||||||||||||:|:|::::||||.:|:|:|||:|||.|.:||||||
  Fly   385 HFSGEPVQFSYMPDLVLDHARDVTIKLHHRLGRYVQLHLYFAARWMMISEITFISAPVVGNFTDE 449

  Fly   424 QEQRSNSPSQAQDVHDETNGSEYQANRNKPNGVGGSAGGLGEGVAAAGGDIVGNNKYNNGPQLIA 488
               .:|...|:..       |||...|::          :|..:::      |..:..:..|:|:
  Fly   450 ---LANGEKQSVT-------SEYPLQRDE----------VGRAISS------GGERSQHTTQVIS 488

  Fly   489 PRPIDQEPNDANFIGVVIVVLTTIIILLVAIILFIVSRTKRARG-SNVLDAFQYSFNPNTLGGN- 551
            |:|||.:..:.:|:||:|.||.|||:||||.||.||:|.|..|. .|.|||||::|:|:||.|| 
  Fly   489 PKPIDHQEPETSFVGVIITVLGTIIMLLVAFILLIVARNKHVRSRENGLDAFQHNFSPDTLNGNG 553

  Fly   552 VDKHRPNGNSIKANVDDND-SIGKNSLYHEPFNVNMYTCGVNGYAAVNDLQ-CNMTPDYTDVPE- 613
            |.|       :...:|||: ||.||||||||||.||||...:. ..:|||| .:::|||||||: 
  Fly   554 VLK-------VVTTMDDNESSIDKNSLYHEPFNANMYTSAASA-CPMNDLQRQHVSPDYTDVPDI 610

  Fly   614 --GGYAVPHMQDYMPSSKMGGGAPGGGGYVNVRRTPPPPL----------------SSIFPRPPT 660
              ..|||||||..:|::...|...|.|......|...|..                ::..|.|..
  Fly   611 VCQDYAVPHMQQLLPNAPPCGSGCGTGTGTGPGRGSSPEFVVATGKVTASARNSLNAATLPLPSP 675

  Fly   661 VPPPPMEKYYATTAIFK---PLKGPGSERSGCSSNTNTVSS-------GGGKSSH 705
            ..|||:|||||.|.:..   |:..|||:.||..|::.|.::       |.||..|
  Fly   676 PVPPPLEKYYAATPVSSKPMPVAPPGSQSSGSLSSSTTAATTPTSGVVGVGKPHH 730

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
smalNP_723165.2 FA58C 81..233 CDD:238014 119/151 (79%)
DdrNP_001014474.3 FA58C 109..261 CDD:238014 119/151 (79%)
PTKc_DDR 753..1040 CDD:270644
Blue background indicates that the domain is not in the aligned region.

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