DRSC/TRiP Functional Genomics Resources

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Protein Alignment smal and Ddr2

DIOPT Version :9

Sequence 1:NP_723165.2 Gene:smal / 5740323 FlyBaseID:FBgn0085409 Length:939 Species:Drosophila melanogaster
Sequence 2:XP_036018652.1 Gene:Ddr2 / 18214 MGIID:1345277 Length:864 Species:Mus musculus


Alignment Length:697 Identity:194/697 - (27%)
Similarity:281/697 - (40%) Gaps:195/697 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 LTRSPPTTTPTAAAPRPPCRAPRWTLCLWTLVIASGCLMLNAPTTMAFDIATCNVPLGMESLLIT 90
            :|..|..::.....||.|.     .|.|..|::.|....:|.        |.|..||||....|.
Mouse     1 MTPDPTPSSEMIPIPRMPL-----VLLLLLLILGSAKAQVNP--------AICRYPLGMSGGHIP 52

  Fly    91 DAQITASSAHDMAFVGPQHARLKTDNDGGAWCPKHMVS-NALKEYLQVDLLQTHVITAIRTQGRY 154
            |..|||||....: ...::.||.::...|||||:..|. :.|||:||:||...|.||.:.||||:
Mouse    53 DEDITASSQWSES-TAAKYGRLDSEEGDGAWCPEIPVQPDDLKEFLQIDLRTLHFITLVGTQGRH 116

  Fly   155 GKGQGQEYTEAYVLEYWRPGFDKWQRWKNIQGKEILPGNINTYSEVENALQPIIFASKIRIYPYG 219
            ..|.|.|:...|.:.|.|.| .:|..|:|..||::|.||.|.|......|:|.|.|..:|:.|..
Mouse   117 AGGHGIEFAPMYKINYSRDG-SRWISWRNRHGKQVLDGNSNPYDVFLKDLEPPIVARFVRLIPVT 180

  Fly   220 QYDRTVCLRAEIVGCPWEEGIVSYSIPKGVQ----RGMEVDLSDKTYDGNEQGDRYVDGLGQLVD 280
            .:...||:|.|:.||.|.:|:|||:.|.|.|    .|..:.|:|..||| ..|....:|||||.|
Mouse   181 DHSMNVCMRVELYGCVWLDGLVSYNAPAGQQFVLPGGSIIYLNDSVYDG-AVGYSMTEGLGQLTD 244

  Fly   281 GQKGKDNFRTDIHGF--GKGYEWIGWRND--TPGLLGKPVEIVFEFDTVRNFSAIVLHTNNMFTK 341
            |..|.|:| |..|.:  ..||:::||||:  |.|.    :||:||||.:|||:.:.:|.||||.|
Mouse   245 GVSGLDDF-TQTHEYHVWPGYDYVGWRNESATNGF----IEIMFEFDRIRNFTTMKVHCNNMFAK 304

  Fly   342 DVQVFVHAKVFFSIGGRYFSGEPVQFSYMPDTIMDHARDVTIKLHHRVGKYLKINLYFAVKWIML 406
            .|::|...:.:|......:....|.|..:.|.:...||.||:.||||:...:|...:||..|:|.
Mouse   305 GVKIFKEVQCYFRSEASEWEPTAVYFPLVLDDVNPSARFVTVPLHHRMASAIKCQYHFADTWMMF 369

  Fly   407 SEISFISVPAMGNFTDEQEQRSNSPSQAQDVHDETNGSEYQANRNKPNGVGGSAGGLGEGVAAAG 471
            |||:|.|..||                                                      
Mouse   370 SEITFQSDAAM------------------------------------------------------ 380

  Fly   472 GDIVGNNKYNNGPQL----IAPRPIDQ--EPNDANFIGVVIVVLTTIIILLVAIILFIVSR---- 526
                    |||...|    :||...|.  :.:|:| ..::|..|..||.:|:|||:.|:.|    
Mouse   381 --------YNNSGALPTSPMAPTTYDPMLKVDDSN-TRILIGCLVAIIFILLAIIVIILWRQFWQ 436

  Fly   527 ---TKRARGSNVLDAFQYSFNPNTLGGNVDKHRPNGNSIKANVDDNDSIGKNSLYHEPFNVNMYT 588
               .|.:|  .:||                    :..::..::....|:..|:....|       
Mouse   437 KMLEKASR--RMLD--------------------DEMTVSLSLPSESSMFNNNRSSSP------- 472

  Fly   589 CGVNGYAAVNDLQCNMTPDYTDVPEGGYAVPHMQDYMPSSKMGGGAPGGGGYVNVRRTPPPPLSS 653
                     ::.:.|.|.|        ...|...||...|::            :|:.|.     
Mouse   473 ---------SEQESNSTYD--------RIFPLRPDYQEPSRL------------IRKLPE----- 503

  Fly   654 IFPRPPTVPPPPMEKYYATTAIFKPLKGPGSERSGCSSNTNTVSSGG 700
                            :|          ||.|.||||.........|
Mouse   504 ----------------FA----------PGEEESGCSGVVKPAQPNG 524

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
smalNP_723165.2 FA58C 78..234 CDD:214572 61/156 (39%)
FA58C 81..233 CDD:238014 60/152 (39%)
Ddr2XP_036018652.1 FA58C 42..194 CDD:238014 60/153 (39%)
PKc_like 567..860 CDD:419665
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 100 1.000 Domainoid score I6997
eggNOG 1 0.900 - - E1_KOG1094
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H68505
Inparanoid 1 1.050 527 1.000 Inparanoid score I1219
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001292
OrthoInspector 1 1.000 - - mtm8799
orthoMCL 1 0.900 - - OOG6_103661
Panther 1 1.100 - - O PTHR24416
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X998
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1110.820

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