DRSC/TRiP Functional Genomics Resources

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Protein Alignment smal and ddr-2

DIOPT Version :10

Sequence 1:NP_723165.2 Gene:smal / 5740323 FlyBaseID:FBgn0085409 Length:939 Species:Drosophila melanogaster
Sequence 2:NP_508572.1 Gene:ddr-2 / 180622 WormBaseID:WBGene00017381 Length:797 Species:Caenorhabditis elegans


Alignment Length:585 Identity:162/585 - (27%)
Similarity:263/585 - (44%) Gaps:125/585 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 TTMAFDIATCNVPLGMESLLITDAQITASSAHDMAFVGPQHARLKTDNDGGAWCPKHMVSNALKE 133
            |.:|.::..|:..|||.:..|.|.||:|||:.|:...||||||...::..||||||:.:::..||
 Worm    16 TVVALELRECSHQLGMSNRKIRDEQISASSSFDLQSTGPQHARAHQESGSGAWCPKNQINSLSKE 80

  Fly   134 YLQVDLLQTHVITAIRTQGRYGKGQGQEYTEAYVLEYWRPGFDKWQRWKNIQGKEILPGNINTYS 198
            :||:......|||::.||||:..|:|.||..|:.::||||..:.|..:|:....|.:|.|.:|..
 Worm    81 WLQISFSVDTVITSVETQGRFDDGRGMEYATAFKIQYWRPSLNAWASYKDDFELETIPANNDTEH 145

  Fly   199 EVENALQPIIFASKIRIYPYGQYDRTVCLRAEIVGCPWEEGIVSYSIPKG-VQRGMEVDLSDKTY 262
            .:...|...|.|.:|||.|.....||||:|.|:.|||:::.:|.|::.:| :|.|  :...|.:|
 Worm   146 AIRRHLDRAIIARRIRIVPVSNSTRTVCMRVEVFGCPFDDSLVFYNVDQGDLQSG--ISYHDFSY 208

  Fly   263 DGN-EQGDRYVDGLGQLVDGQKGKDNFRTDIHGFGKGYEWIGWRNDTPGLLGKPVEIVFEFDTVR 326
            ||| ........|:|:|.||:.||:|.      |...::|:|||....|    .|::.|||..:|
 Worm   209 DGNLANSPHLTGGIGKLYDGEVGKNNV------FVNHHKWVGWRRKRNG----NVKLAFEFSELR 263

  Fly   327 NFSAIVLHTNNMFTKDVQVFVHAKVFFSIGGRYFSGEPVQFSYMPDTIMDHARDVTIKLHHRVGK 391
            |.|.|::||:|.|.|..:.|..|.|.|||.|:.||...|.|:...||..:..|.:.|.:::|:.|
 Worm   264 NISGILIHTSNEFKKSAKAFSSATVLFSINGKDFSDTIVHFNNPEDTESEVPRWIRIPVNNRIAK 328

  Fly   392 YLKINLYFAV--KWIMLSEISFISVPAMGNFTDEQEQRSNSPSQAQDVHDETNGSEYQANRNKPN 454
            ..||.|.|..  .|:.:||::|.|                         :.||            
 Worm   329 VAKIRLNFGTDSDWLFISEVNFES-------------------------NHTN------------ 356

  Fly   455 GVGGSAGGLGEGVAAAGGDIVGNNKYNNGPQLIAPRPIDQEPNDANFIGVVIVVLTTIIILLVAI 519
                        :.....|:|       .|..::...:.:..:..:....:|.....:|:.::.:
 Worm   357 ------------IELLNDDVV-------IPDSVSYFSVTEHDDGTSMFAFIIFFFMFLIVAVIIL 402

  Fly   520 ILFIVSRTKRARGSNVLDAFQYSFNPN-------TLGGNVDKHRPNGNSIKANVDD--NDSIGKN 575
            .:....|..|.:.|        |.:||       |:.||..||..:.::.:...|:  |..|.|.
 Worm   403 TVLYRKREYRVKAS--------SPSPNAKREILLTIDGNTIKHHVSPSTYQMARDNLQNALIEKM 459

  Fly   576 SL------YHEPFNVNMYTC-----------GVNG----------------YAAVNDLQCNMTPD 607
            .:      |.||   ::..|           |::|                |:...::.|...|:
 Worm   460 PMSPIISDYAEP---DISVCSDVTANTPLLYGIDGPYDTQKRSNPLSSMVKYSDYGEVYCTTLPE 521

  Fly   608  607
             Worm   522  521

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
smalNP_723165.2 FA58C 81..233 CDD:238014 62/151 (41%)
ddr-2NP_508572.1 FA58C 29..180 CDD:330301 62/150 (41%)
TyrKc 527..785 CDD:197581
Blue background indicates that the domain is not in the aligned region.

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