DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment uex and AT1G47330

DIOPT Version :10

Sequence 1:NP_001104390.2 Gene:uex / 5740320 FlyBaseID:FBgn0262124 Length:834 Species:Drosophila melanogaster
Sequence 2:NP_175166.2 Gene:AT1G47330 / 841136 AraportID:AT1G47330 Length:527 Species:Arabidopsis thaliana


Alignment Length:442 Identity:134/442 - (30%)
Similarity:210/442 - (47%) Gaps:102/442 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   188 LAIIIIVTCLGFSALFSGLNLGLMSMDRTELKILRNTGTEKEKKYASKIAPVRDQGNYLLCSILL 252
            |.::||:..:.|:.|.:||.|||||:...:|::|..:|..:::..|.||.||....:.|||::|:
plant    14 LYVVIIIALVAFAGLMAGLTLGLMSLGLVDLEVLIKSGRPQDRINAGKIFPVVKNQHLLLCTLLI 78

  Fly   253 GNVLVNSTFTILLDGLTSGLFAVIFSTLAIVLFGEITPQAVCSRHGLAIGAKTILVTKTVMAITA 317
            ||.:......|.||.:.....|::.|...|::||||.|||||:|:||.:||......:.::.:..
plant    79 GNSMAMEALPIFLDKIVPPWLAILLSVTLILVFGEIMPQAVCTRYGLKVGAIMAPFVRVLLVLFF 143

  Fly   318 PLSYPVSRILDKLLGEEIGNVYNRERLKELVRVTNDV----NDLDKNEVNIISGALELRKKTVAD 378
            |:|||:|::||.:||:..|.:..|..||..|....:.    .||..:|.:||:|||||.:||..|
plant   144 PISYPISKVLDWMLGKGHGVLLRRAELKTFVNFHGNEAGKGGDLTTDETSIITGALELTEKTAKD 208

  Fly   379 VMTHINDAFMLSLDALLDFETVSEIMNSGYSRIPVYDGDRKNIVTLLYIKDLAFVDTDDNTPLKT 443
            .||.|::||.|.||..|:.||::.||:.|:||:|||..:..:|:.|:.:|:|..||.....||:.
plant   209 AMTPISNAFSLELDTPLNLETLNTIMSVGHSRVPVYFRNPTHIIGLILVKNLLAVDARKEVPLRK 273

  Fly   444 LCEFYQNPVHFVFEDYTLDIMFNQFKEGTIGHIAFVH------------------RVNNEGDGDP 490
            :.   ...:..|.|...|..:.|:|::|. .|||.|:                  |..|:...|.
plant   274 MS---MRKIPRVSETMPLYDILNEFQKGH-SHIAVVYKDLDEQEQSPETSENGIERRKNKKTKDE 334

  Fly   491 FY--------------------------------------------------------------- 492
            .:                                                               
plant   335 LFKDSCRKPKAQFEVSEKEVFKIETGDAKSGKSENGEEQQGSGKTSLLAAPAKKRHRGCSFCILD 399

  Fly   493 -------------ETVGLVTLEDVIEELIQAEIVDETDVFVDNRTKTRRNRY 531
                         |.||::|:|||||||:|.||:||||.:|:...:.|.|.:
plant   400 IENTPIPDFPTNEEVVGVITMEDVIEELLQEEILDETDEYVNIHNRIRVNMH 451

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
uexNP_001104390.2 TlyC 187..>517 CDD:440865 129/426 (30%)
CAP_ED <604..>650 CDD:469590
AT1G47330NP_175166.2 TlyC 10..>311 CDD:440865 110/300 (37%)
Herpes_BLLF1 <462..518 CDD:282904
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.