DRSC/TRiP Functional Genomics Resources

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Protein Alignment uex and cnnm-3

DIOPT Version :10

Sequence 1:NP_001104390.2 Gene:uex / 5740320 FlyBaseID:FBgn0262124 Length:834 Species:Drosophila melanogaster
Sequence 2:NP_001309670.1 Gene:cnnm-3 / 180591 WormBaseID:WBGene00016343 Length:797 Species:Caenorhabditis elegans


Alignment Length:180 Identity:33/180 - (18%)
Similarity:53/180 - (29%) Gaps:62/180 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   258 RRIFQPKQQGKIGITLDTSWPE----PATNSEDDREASELAAQFYLGWFGHPIFAEAGNYPRVMI 318
            :|...|.|...:.:.::|...|    |.|..:..|...           ..|.|          .
 Worm    13 QRKLSPSQPNSVLVFIETKSEEIFVNPTTGHQTSRSTP-----------ASPSF----------F 56

  Fly   319 DRIAAMSRQQGYTKSRL---------------PTFTKEEIDRIKGTADFFGINSYT-SVLVRKND 367
            |.|...|....:.:|.|               |....|.|:.      .||.|.:| :|:|...:
 Worm    57 DTINLCSSSHHHIRSLLRSRFVSYHFLCDILAPEIATEAINL------GFGRNGFTFTVVVTVTN 115

  Fly   368 RNNTANFPVPSFNHDMGVVESADPDWPKS---------GSVWLHVVPSGM 408
            |.      |...::|..::|:......||         ..|..|:.|..:
 Worm   116 RT------VSVTSNDTEIIENGSTREDKSRGIKEFEHGNRVVFHLFPRSL 159

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
uexNP_001104390.2 TlyC 187..>517 CDD:440865 33/180 (18%)
CAP_ED <604..>650 CDD:469590
cnnm-3NP_001309670.1 TlyC 198..>491 CDD:440865
Blue background indicates that the domain is not in the aligned region.

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