DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment uex and cnnm4

DIOPT Version :9

Sequence 1:NP_001104390.2 Gene:uex / 5740320 FlyBaseID:FBgn0262124 Length:834 Species:Drosophila melanogaster
Sequence 2:NP_001090672.1 Gene:cnnm4 / 100036645 XenbaseID:XB-GENE-999369 Length:769 Species:Xenopus tropicalis


Alignment Length:736 Identity:323/736 - (43%)
Similarity:445/736 - (60%) Gaps:69/736 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 IVGIRLE---DETVETKNGIPTVLVDKEQQFRVFGSGLEENT----AITFTNEKNDYGGPCLKPA 115
            |:|.|||   .....:.:|...|:.....:.||:|..|.|::    |.|..:..:.....||:.:
 Frog    42 ILGFRLERSDRHAALSPDGELEVVEGSRLELRVYGLHLREDSGHILAFTEYSPGSQDNRSCLEDS 106

  Fly   116 TDL-FTPIEVSSNGFSA---------LYSVKFPSFINEFFICAKTAEKTTNHSKAATTTPLEHQG 170
            .|| .|.:.||.:||.|         :..::.......:.:|.         |:........|.|
 Frog   107 RDLVLTRLNVSDDGFGAAGAAIVRLDVLPLRKSQSSRVYVLCT---------SRGPGLPWKLHTG 162

  Fly   171 NSDFLKIKTFE-PLIPVWLAIIIIVTCLGFSALFSGLNLGLMSMDRTELKILRNTGTEKEKKYAS 234
            ....|::...| ||:|:||...||...|..|.:|||||||||::|..||::::..||||||:|||
 Frog   163 PDGRLRVLEEEKPLLPIWLQACIIAVLLTLSGIFSGLNLGLMALDPMELRVVQRCGTEKEKRYAS 227

  Fly   235 KIAPVRDQGNYLLCSILLGNVLVNSTFTILLDGLT-SGLFAVIFSTLAIVLFGEITPQAVCSRHG 298
            ||.|||.:|||||||:||||||||:|.|.|||.|. |||.||:.||..||:.|||.|||:|||||
 Frog   228 KIEPVRRKGNYLLCSLLLGNVLVNTTLTALLDELIGSGLAAVLASTTGIVVLGEIVPQALCSRHG 292

  Fly   299 LAIGAKTILVTKTVMAITAPLSYPVSRILDKLLGEEIGNVYNRERLKELVRVTNDVNDLDKNEVN 363
            ||:||.|:.:|:..|.:|.|::|||||:||..||:|||.|||||:|.|:::||...:.:.:.|:|
 Frog   293 LAVGANTLWLTRIFMLLTFPVAYPVSRLLDCALGQEIGTVYNREKLLEMLKVTEPYSGIVREEMN 357

  Fly   364 IISGALELRKKTVADVMTHINDAFMLSLDALLDFETVSEIMNSGYSRIPVYDGDRKNIVTLLYIK 428
            ||.||||||.|||.||||.:.|.|||..||:|||.|:|.||.|||:|||||:.:|.|||.:||:|
 Frog   358 IIQGALELRTKTVEDVMTKVEDCFMLPSDAVLDFNTMSSIMESGYTRIPVYENERSNIVDILYVK 422

  Fly   429 DLAFVDTDDNTPLKTLCEFYQNPVHFVFEDYTLDIMFNQFKEGTIGHIAFVHRVNNEGDGDPFYE 493
            ||||||.||.|||.|:..||.:|:||||.|..||.:..:||:|. .|:|.|.:||:||:||||||
 Frog   423 DLAFVDPDDCTPLSTITRFYSHPLHFVFSDTKLDAVLEEFKKGK-SHLAIVQKVNSEGEGDPFYE 486

  Fly   494 TVGLVTLEDVIEELIQAEIVDETDVFVDNRTKTR-RNRYKKADFSAFAERREVQTVRISPQLTLA 557
            .:|||||||||||:|::||:||:|::.|||:|.| :.|..:.|||.|.:......|:|||||.||
 Frog   487 VMGLVTLEDVIEEIIKSEILDESDLYTDNRSKKRVKRRQDRKDFSVFKDADNELRVKISPQLLLA 551

  Fly   558 TFQYLSTAVDAFKKDVISELILRRLLN-QDVFHNIKTKGKSKDDPSLYIFTQGKAVDFFVLILEG 621
            ..::|||.|..|...::||..|.|||. .||...:......|.....:::.:.|..|:|:|||:|
 Frog   552 AHRFLSTEVPLFAPALVSEKTLLRLLKYPDVVQELHFNEDDKKASENFLYQRSKIADYFILILQG 616

  Fly   622 RVEVTIGKEALMFESGPFTYFGTQAL-VPNVV-IDSPTQMGSL----------QSLNMDSKIRQS 674
            :|||..|||.:.||||.|:|:|..|: .|:.. :.||:.|.||          :|.::.|.|..|
 Frog   617 KVEVEAGKENMKFESGAFSYYGVMAINTPSAAELRSPSHMSSLNRSISLSCHERSDSISSTISGS 681

  Fly   675 ---------FVPDYSVRAISDVIYITIKRVLYLTAKKATLLEKSRKS---------GTFS--SET 719
                     ::.|:||||:.|:.::.|.|..|..|..::.|:.|.:|         .|.|  ||.
 Frog   682 NTQLSAQAQYMADFSVRALGDLQFVKITREQYQGALMSSRLDSSPQSPEGGTRKPDSTLSERSEV 746

  Fly   720 FDDEVERLL------HSITEN 734
            .:||...||      ||:..|
 Frog   747 LEDETTSLLNQRNSQHSLQHN 767

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
uexNP_001104390.2 DUF21 188..361 CDD:279876 102/173 (59%)
CBS_pair_CorC_HlyC_assoc 384..506 CDD:239963 75/121 (62%)
CAP_ED <604..>650 CDD:294041 21/46 (46%)
cnnm4NP_001090672.1 CorC_HlyC 179..>510 CDD:332085 202/331 (61%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 717..769 14/51 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 217 1.000 Domainoid score I2629
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 573 1.000 Inparanoid score I1036
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1446644at2759
OrthoFinder 1 1.000 - - FOG0000343
OrthoInspector 1 1.000 - - otm48115
Panther 1 1.100 - - LDO PTHR12064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X235
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
99.070

Return to query results.
Submit another query.