DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Stacl and STAC

DIOPT Version :9

Sequence 1:NP_001260996.1 Gene:Stacl / 5740318 FlyBaseID:FBgn0263980 Length:1970 Species:Drosophila melanogaster
Sequence 2:XP_024309490.1 Gene:STAC / 6769 HGNCID:11353 Length:406 Species:Homo sapiens


Alignment Length:590 Identity:127/590 - (21%)
Similarity:207/590 - (35%) Gaps:217/590 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   586 QLQDSIEALNRTQTRGIEGQLYNKVNELQEDLSMKKFDLRAKQIHLAAIRAQKDLFVSKVEPTSP 650
            :::::..|||      .:|.:: ::.:|:..||.|...||:|         ..|.|..:......
Human    25 KIEEASHALN------YQGNIF-QLQKLKRSLSFKTKSLRSK---------SADNFFQRTNSEDM 73

  Fly   651 RNERKFSAATAPSMKTKWLKAFKSLKPAGSGSAQQADSQPPRQNQMYHAVSTVLTLRRNGASSTA 715
            :.:....|..:||         .|..||                                ..|..
Human    74 KLQAHMVAEISPS---------SSPLPA--------------------------------PGSLT 97

  Fly   716 SEPLRPNL---DGSHHLQEYTYKKITACDVCSQILRG-HTRQGLRCRICKLNAHGDCAPNL--PR 774
            |.|.|..|   ..:|..|||.:||.|.||||:.::.| :.:.||||:.||::.|..|...|  .|
Human    98 STPARAGLHPGGKAHAFQEYIFKKPTFCDVCNHMIVGTNAKHGLRCKACKMSIHHKCTDGLAPQR 162

  Fly   775 CQPK-QKLLRRQKSTSELENRVDIEEETGADKSVQAKQMDGSVAGGSALPVPVLSERELGRAPPP 838
            |..| .|..||..|:..|     |.|:.|..|.|.      .:|.|:.:. ||......|     
Human   163 CMGKLPKGFRRYYSSPLL-----IHEQFGCIKEVM------PIACGNKVD-PVYETLRFG----- 210

  Fly   839 DIPIVSVSELALQEQQQQQQQQQQQHQQQQRSLASVAQAAAVRAGRGVRPPPVAMPILGVQLQQQ 903
                                             .|:||    |..:|                  
Human   211 ---------------------------------TSLAQ----RTKKG------------------ 220

  Fly   904 ELQQQRGGLPVPSQDISSSSAPHSPRRQKLNLRMKSLSLDSPESSELHGQFRRRTQLPGTGASTS 968
                            ||.|...||.|..     .|..::.||.:                    
Human   221 ----------------SSGSGSDSPHRTS-----TSDLVEVPEEA-------------------- 244

  Fly   969 AGSGYYHGGSGGHLEHSTPPSNNSRLHSPSSPSHPGRKLLYATRGMRGGSVDLPDEME--KSQSS 1031
                  :|..||:         :.|..|.|..::|           ..|:.|..|..:  ..|.|
Human   245 ------NGPGGGY---------DLRKRSNSVFTYP-----------ENGTDDFRDPAKNINHQGS 283

  Fly  1032 ASTSPCLSPKTHRLLPTNLYVIIYNFKARHADELDLKAGYKVTVIDNSDPDWWKGKVLGRVGYFP 1096
            .|..|         |..|.||.:|.|..:..::|:::.|..:|::::|:.||||||:..|:|:||
Human   284 LSKDP---------LQMNTYVALYKFVPQENEDLEMRPGDIITLLEDSNEDWWKGKIQDRIGFFP 339

  Fly  1097 SKYCVRLNANEKPLQVTHNLQVSDSERGENLTLLRDQIVIQTGDEVNGMVMIRAAEHGQGYCPIK 1161
            :.:..||..|||..:..... :...|:|: :||..:||.:.:.:|.:|.:.:.:.:. :|..|:.
Human   340 ANFVQRLQQNEKIFRCVRTF-IGCKEQGQ-ITLKENQICVSSEEEQDGFIRVLSGKK-KGLIPLD 401

  Fly  1162 YLQEV 1166
            .|:.:
Human   402 VLENI 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
StaclNP_001260996.1 BAR 290..489 CDD:299863
C1 727..773 CDD:237996 21/48 (44%)
SH3 1051..1102 CDD:302595 18/50 (36%)
STACXP_024309490.1 C1 112..163 CDD:237996 21/50 (42%)
STAC2_u1 170..>241 CDD:318801 26/163 (16%)
SH3_Stac_1 293..345 CDD:212767 18/51 (35%)
SH3_Stac_2 352..402 CDD:212768 10/52 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 57 1.000 Domainoid score I10868
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm41179
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR15135
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1389
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
55.010

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