DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Stacl and stac3

DIOPT Version :9

Sequence 1:NP_001260996.1 Gene:Stacl / 5740318 FlyBaseID:FBgn0263980 Length:1970 Species:Drosophila melanogaster
Sequence 2:NP_001003505.1 Gene:stac3 / 445111 ZFINID:ZDB-GENE-040801-248 Length:334 Species:Danio rerio


Alignment Length:487 Identity:102/487 - (20%)
Similarity:168/487 - (34%) Gaps:176/487 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   687 DSQPPRQNQMYHAVSTVLTL------RRNGASSTASEPLRPNLDGSHHLQEYTYKKITACDVCSQ 745
            |:.|..:|.:....:||..:      ..........||:....|..|..:::..||...||||::
Zfish    17 DNPPAPENVVKEDDNTVYFVYDEEVEEEEAPPPPTPEPIVQVNDKPHKFKDHYCKKPKFCDVCAR 81

  Fly   746 ILRGHTRQGLRCRICKLNAHGDCAPNLPRCQPKQKLLRRQKSTSELENRVDIEEETGADKSVQAK 810
            ::..:.:..|||:.||.|.|..|                                   ...||.:
Zfish    82 MIVLNNKFALRCKNCKTNIHHSC-----------------------------------QSYVQFQ 111

  Fly   811 QMDGSVAGGSALPVPVLSERELGRAPPPDIPIVSVSELALQEQQQQQQQQQQQHQQQQRSLASVA 875
            :..|.:                    ||.......|.|..||.....||.               
Zfish   112 RCFGKI--------------------PPGFRRAYSSPLYDQEINNPGQQN--------------- 141

  Fly   876 QAAAVRAGRGVRPPPVAMPI-LGVQLQQQELQQQRGGLPVPSQDISSSSAPHSPRRQKLNLRMKS 939
                       |..||...: :||.:..:|  :::|     |:|          ::..:.:.|:.
Zfish   142 -----------RTDPVFDTLRVGVIMANKE--RKKG-----SED----------KKNMMMMMMEE 178

  Fly   940 LSLDSPESSELHGQFRRRTQLPGTGASTSAGSGYYHGGSGGHLEHSTPPSNNSRLHSPSSPSHPG 1004
            .....|:..|             .||         .|...|..:..|                  
Zfish   179 EEAQQPKEDE-------------EGA---------EGKQDGDKKDKT------------------ 203

  Fly  1005 RKLLYATRGMRGGSVDLPDEMEKSQSSASTSPCLSPKTHRLLPTNLYVIIYNFKARHADELDLKA 1069
                 ||          .|:.:|.|.:.|.|             :.|:.:|.|||...|:||...
Zfish   204 -----AT----------DDKNKKQQQTFSQS-------------HYYMALYRFKAIEKDDLDFHP 240

  Fly  1070 GYKVTVIDNSDPDWWKGKVLGRVGYFPSKYCVRLNANEKPLQVTHNLQVSDSERGENLTLLRDQI 1134
            |.::||:|:|:.:||:||:..:.||.|..|.:|:.|.|:..:||.:. |.:.|.|: :||.:|||
Zfish   241 GDRITVLDDSNEEWWRGKIGEKTGYLPMTYIIRVRAGERVYKVTRSF-VGNREMGQ-ITLKKDQI 303

  Fly  1135 VIQTGDEVNGMVMIRAAEHGQGYCPIKYLQEV 1166
            |::.|:||||.:.:..... .|:.|...|.|:
Zfish   304 VVKKGEEVNGYLKVSTGRK-LGFFPADLLHEL 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
StaclNP_001260996.1 BAR 290..489 CDD:299863
C1 727..773 CDD:237996 15/45 (33%)
SH3 1051..1102 CDD:302595 21/50 (42%)
stac3NP_001003505.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..26 3/8 (38%)
C1 63..108 CDD:237996 15/79 (19%)
STAC2_u1 120..>197 CDD:293269 21/141 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 178..215 12/91 (13%)
SH3 221..273 CDD:302595 21/51 (41%)
SH3 280..330 CDD:302595 18/52 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm25075
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR15135
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1389
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
44.010

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