DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Stacl and Stac2

DIOPT Version :9

Sequence 1:NP_001260996.1 Gene:Stacl / 5740318 FlyBaseID:FBgn0263980 Length:1970 Species:Drosophila melanogaster
Sequence 2:NP_666140.1 Gene:Stac2 / 217154 MGIID:2144518 Length:408 Species:Mus musculus


Alignment Length:459 Identity:97/459 - (21%)
Similarity:157/459 - (34%) Gaps:164/459 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   718 PLRP-NLDGSHHLQEYTYKKITACDVCSQILRGHTRQGLRCRICKLNAHGDCAPNL--PRCQPKQ 779
            ||:| .|   |..||:.:|:.:.|::|.|::.|:::|||||:.||::.|..|:..:  .:|..|.
Mouse   104 PLKPVRL---HSFQEHVFKRASPCELCHQLIVGNSKQGLRCKTCKVSVHLWCSEEISHQQCPGKT 165

  Fly   780 KLLRRQKSTSELENRVDIEEETGADKSVQAKQMDGSVAGGSALPVPVLSERELGRAPPPDIPIVS 844
            ....|:..:|.|                                        |..||||      
Mouse   166 STSFRRNFSSPL----------------------------------------LVHAPPP------ 184

  Fly   845 VSELALQEQQQQQQQQQQQHQQQQRSLASVAQAAAVRAGRGVRPPPVAMPILGVQLQQQELQQQR 909
                                       |......:...|...:..||             .:..|
Mouse   185 ---------------------------ACAMNKESPPTGTSGKVDPV-------------YETLR 209

  Fly   910 GGLPVPSQDISS-SSAPHSPRRQKLNLRMKSLSLDSPESSELHGQFRRRTQLPG----TGASTSA 969
            .|..:...:.|| ||...||.|        |||.....:.:..|..|...:.||    |..:.|.
Mouse   210 YGTSLALMNRSSFSSTSESPTR--------SLSERDELTEDGEGSIRSSEEGPGDSVFTAPAESE 266

  Fly   970 GSGYYHGGSGGHLEHSTPPSNNSRLHSPSSPSHPGRKLLYATRGMRGGSVDLPDEMEKSQSSAST 1034
            |||               |...|....|  |..|.||                          ..
Mouse   267 GSG---------------PEEKSPGQQP--PKLPLRK--------------------------DV 288

  Fly  1035 SPCLSPKTHRLLPTNLYVIIYNFKARHADELDLKAGYKVTVIDNSDPDWWKGKVLGRVGYFPSKY 1099
            .|..|           ||.:|.|..:..::|.|:.|.::.::|:|:.||||||:..|||:||:.:
Mouse   289 GPMYS-----------YVALYKFLPQENNDLALQPGDRIMLVDDSNEDWWKGKIGDRVGFFPANF 342

  Fly  1100 CVRLNANEKPLQVTHNLQVSDSERGENLTLLRDQIV--IQTGDEVNGMVMIRAAEHGQGYCPIKY 1162
            ..|:...|...:...... .:.|:| .::|..:||.  :....:.:|.:.:.:.:. :|..|...
Mouse   343 VQRVRPGENVWRCCQPFS-GNKEQG-YMSLKENQICVGVSRSKDSDGFIRVSSGKK-RGLVPADS 404

  Fly  1163 LQEV 1166
            |.|:
Mouse   405 LAEI 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
StaclNP_001260996.1 BAR 290..489 CDD:299863
C1 727..773 CDD:237996 17/47 (36%)
SH3 1051..1102 CDD:302595 20/50 (40%)
Stac2NP_666140.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..29
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 64..97
C1 111..161 CDD:237996 17/49 (35%)
STAC2_u1 167..292 CDD:293269 41/261 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 219..286 24/91 (26%)
SH3_Stac2_C 293..345 CDD:212918 21/62 (34%)
SH3 352..403 CDD:302595 8/53 (15%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 57 1.000 Domainoid score I10824
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm43247
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR15135
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1389
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
66.010

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