DRSC/TRiP Functional Genomics Resources

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Protein Alignment Stacl and F19C7.8

DIOPT Version :9

Sequence 1:NP_001260996.1 Gene:Stacl / 5740318 FlyBaseID:FBgn0263980 Length:1970 Species:Drosophila melanogaster
Sequence 2:NP_001294330.1 Gene:F19C7.8 / 177226 WormBaseID:WBGene00017597 Length:438 Species:Caenorhabditis elegans


Alignment Length:438 Identity:103/438 - (23%)
Similarity:165/438 - (37%) Gaps:115/438 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   815 SVAGGSALPVPVLSERELGRAPPPDIPIVSVSELALQ---EQQQQQQQQQQQHQQQQRSLASVAQ 876
            :.|||::.|:| |..|....:.|.....::.|....|   .|.....||||.|||..:::.|..:
 Worm    24 TTAGGASRPLP-LHHRSHSASTPTTTSSITASPSLSQLPPHQPYHLHQQQQHHQQLHKTMTSALE 87

  Fly   877 ---AAAVRAGRGVRPPPVAMPILGVQLQQQELQQQRGGLPVPSQDISSSSA-------------- 924
               ::.....|.:|....:.  .|.......::..      |.:..:|.||              
 Worm    88 KCTSSLSEIHRLLRESSTSS--YGTMSTNSSIESS------PIEQATSRSARRKWHSAMRFIQGV 144

  Fly   925 -----PHSPRRQKLNLRMKSLSLDSPESS----------ELHGQFRRRTQLPGTGASTS------ 968
                 |....::...:|.:|:...|.||:          :..|::.||.......||.|      
 Worm   145 QRFKTPVMSHKRTTEIREQSVGRTSCESAIVDPVYLALKQATGRYSRRGSTTFESASPSPRNLSQ 209

  Fly   969 ---AGSGYYHGGS--GGHLEHSTPPSNNS-----RLHSPS------------------------S 999
               ..|||...||  ...|..|||..:|:     |..:|.                        |
 Worm   210 VSLQDSGYVEMGSSKANPLLGSTPQLDNAGRSVGRRRAPKLTQQMKSLSLDCQDMPPRINQNTRS 274

  Fly  1000 PSHPGRKLL---YATRGMRGGSVDLPD------EMEKSQSSASTSPCLSPKTHRLLPTNLYVIIY 1055
            |...|.||.   |...|:.|.| |..|      .:.||:.|:|::          |....|::|:
 Worm   275 PLISGSKLAPRDYRKPGINGSS-DFSDVERSCSPIVKSRRSSSSA----------LHAGGYIVIH 328

  Fly  1056 NFKARHADELDLKAGYKVTVIDNSDPDWWKG-KVLGRVGY---FPSKYCVRLNANEKPLQVTHNL 1116
            .:...:...|.|  |.||.|:||.||||..| ::..|..:   ||:....::.|.|:.:::..|:
 Worm   329 EYSPSNGSSLVL--GEKVRVVDNGDPDWLHGFRLNDRTEHMISFPATCVAQMMAGEQAMRIQQNV 391

  Fly  1117 QVSDSERGENLTLLRDQIV-IQTGDEVNGMVMIRAAEHGQGYCPIKYL 1163
            .|::    :.|.:.||||| :|....|.|.|.:|...:....||:.||
 Worm   392 FVAE----QKLRMYRDQIVFVQPESLVEGKVTVRTEHNALAPCPLSYL 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
StaclNP_001260996.1 BAR 290..489 CDD:299863
C1 727..773 CDD:237996
SH3 1051..1102 CDD:302595 18/54 (33%)
F19C7.8NP_001294330.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - oto20291
orthoMCL 1 0.900 - - OOG6_111119
Panther 1 1.100 - - LDO PTHR15135
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.000

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