DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vml and Vm26Ac

DIOPT Version :10

Sequence 1:NP_001096866.1 Gene:Vml / 5740271 FlyBaseID:FBgn0085362 Length:578 Species:Drosophila melanogaster
Sequence 2:NP_608973.1 Gene:Vm26Ac / 33828 FlyBaseID:FBgn0086266 Length:181 Species:Drosophila melanogaster


Alignment Length:147 Identity:37/147 - (25%)
Similarity:49/147 - (33%) Gaps:49/147 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   437 PSYSAP--AAPSYSAPASSGYSAARAYSAGSAAPASGYSAPKTSSGYSAPASSGSPAASSYSAPA 499
            |.:..|  ..|.:..|...|               .|:..|    |:..|...|           
  Fly    74 PGFGGPGFGGPGFGGPGFGG---------------PGFGGP----GFGRPGFGG----------- 108

  Fly   500 SSTASSGYSAPASKSSGYARSEMDHQILGMARTAGGYGSAAP-SAAY----GAASLPSPPCPKNY 559
                 .|:..|.....|:.|.:     .|.||:.....:..| ...|    ..:.:|||.|||||
  Fly   109 -----PGFGGPGFGGPGFGRGK-----FGFARSYDQDEAQVPVQGTYQQQTTLSEVPSPACPKNY 163

  Fly   560 VFSCSSVFTPAPCSQGY 576
            ||||.:|..|.||  ||
  Fly   164 VFSCEAVIKPVPC--GY 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VmlNP_001096866.1 None
Vm26AcNP_608973.1 Vitelline_membr 155..>180 CDD:371125 18/26 (69%)

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