DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Not1 and AT1G02080

DIOPT Version :9

Sequence 1:NP_001286252.1 Gene:Not1 / 5740252 FlyBaseID:FBgn0085436 Length:2511 Species:Drosophila melanogaster
Sequence 2:NP_171710.4 Gene:AT1G02080 / 839244 AraportID:AT1G02080 Length:2431 Species:Arabidopsis thaliana


Alignment Length:2681 Identity:780/2681 - (29%)
Similarity:1212/2681 - (45%) Gaps:574/2681 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 DSI-YDILQFVKEHGLEADRSSLRHLFSVINFSDLVPSVTVQLQAKLLGIQLERQLHSSSFVSNI 96
            ||| ..:.||| :.|:|.....|:............|: ::||: |::.:..:..|..|:..:.:
plant    76 DSIALQLSQFV-DFGVETSIPVLKTCLDCFTARRSHPN-SLQLE-KVVSLLFKHVLKLSNLATLL 137

  Fly    97 CYAFDQFFASNQKQSLKPVAVADLVGQVARLTGIN-KVCECV-FALALTHSSYTELKHSARNNLK 159
            .:|.:.|       .|...:|.||.      |.:| .:.|.: ||||||.....:.|.:.||.|.
plant   138 PHALNDF-------ELTQESVDDLT------TTLNFSISENIGFALALTDFERLDAKTTGRNLLL 189

  Fly   160 GSLSELIDSYLGNKGTGPADSGLREISFDLLQYLLCCL--SEYVQPQVEAQFLIKLREEFPRQAV 222
            ..:.:|.           |::| :.:|.:|:..:|..|  ||.:...::: ||..|....||...
plant   190 AQIEQLC-----------ANTG-QILSSELIHSVLSFLRKSEDLSMHLDS-FLQFLSSAQPRDDF 241

  Fly   223 PLVLAPFLYGSTTATIAGAGASETDAEAEATTNSNSSSFEADAL-----NEVGIEDIYDHLSEII 282
            ...|.|.|         .....|.........:::|:..:.||:     .||.:.|         
plant   242 SFALTPML---------AQQVHEAPVFRSMDFHTDSADNDLDAILAEIDKEVSVGD--------- 288

  Fly   283 FTNQGKNNIMDTSWINLILEIGYEFTSSVEECKNHLCSRERERAELQSKDVAKIVGLMCRRHSSL 347
                            |:.|:|..||:..::||..|.|    .|.|....:::|||.:.|..:.|
plant   289 ----------------LMGELGCGFTADAQQCKEILSS----FAPLGEATISRIVGNVSRTCADL 333

  Fly   348 LDCNVNLPTPANFWPGQGQGGGSNSSGSSQTQI-TPQQQNPGSSNNNDGSDGNSSSDKKDKKETT 411
            .|   |..|.:.|....|        ....|:: ||                             
plant   334 ED---NQTTFSTFTVALG--------SCIPTELPTP----------------------------- 358

  Fly   412 EATQTWKPDVFVQALKEV-VPQLNWKDVCMELDHPEFVLKDRIGLELLLTILRLATGSNIFPHPE 475
               ::|..|:.|..:|:: .|.::|:.|...|||..|.:.:.......:.|.:.|. ...||...
plant   359 ---RSWNVDILVDTIKQLQAPGISWRKVIENLDHDGFDIPNMESFSFFMRIYKAAC-KEPFPLDA 419

  Fly   476 CIYRHWANTEGQLSLIATMLK-NPDLFSFADFVFSQPALDVLKTAPDADNKEISSWKSLHLVEVL 539
            .....|.|.:||||.:...:. .|::|:|.........:|.:.:..........:|.||.|::||
plant   420 VCGSVWKNMDGQLSFLKHAISAPPEVFTFMHSPRKLVYIDNMHSQEQQLGLSNHAWLSLDLLDVL 484

  Fly   540 LSIADKGYYTQVHELFKFPAQNCPDVLFLALLNTSPPMTPLRQDLFNQLIPTFLGNHPNSNVILA 604
            ..:|::|:...|..|.::|...||..|.|.:.:.......:::::.:.::|..: ..|..:..:.
plant   485 CQLAERGHAVLVSSLLQYPLTQCPRTLLLGMTHIKTAYNLIQREVVSAILPVII-TSPQDSGFIH 548

  Fly   605 SAWSSNNFQLRSNIMNAMSEWYLRGNEFDQVKLSRILDLAQDLKALSALLNARSFLFIIDLACLA 669
            :.|..|...:...|::|.   :|:.:     .:.||:::..:||.||.:|.:......|.||.||
plant   549 NLWHQNAELVLWGIIDAQ---HLKAD-----SMLRIIEICHELKILSVVLESVPVSSSIRLAVLA 605

  Fly   670 SRREYLKLEKWLTDKIREHGEPFMQ---AIIKVLHRRCPQVINAKV--PEDQLPPKQAQLLPETV 729
            |.|..|.:|.||.:.:..:.:.|.:   ..:|.:|........||:  |.|.|    :.|..|..
plant   606 SLRGLLDIENWLPNCLYMYKDLFAEECLKFVKNVHFSESDDFRAKIFHPSDPL----SDLHLEAT 666

  Fly   730 TTMINCLQTCINNCMQPEMVEVIMQMTANVAIMANKARAQQQQQPGLVPPPPPTILRGHRGMDLP 794
            |:::..|:...|.....::||.|.::  |.||:....:.|.                        
plant   667 TSLLKVLKAHDNAITSSQLVEEIEKV--NAAILDCNPKLQN------------------------ 705

  Fly   795 GGIVPPPPQQPFSGNLNAQMFGPGMDPLTNMSNNLAGLNLSGPNGAFNFGNMLTSPSRLMTPGAN 859
                                 |...|.             |.||.   :|:              
plant   706 ---------------------GEAKDS-------------SAPNA---YGD-------------- 719

  Fly   860 PYPLNLMQMPQAPPPPNVGNLGRMLPGGPQQQTPTPTPTAPNPNNPVMADLQIPVSKEVEDEVNS 924
                                                                     :||.|.|:
plant   720 ---------------------------------------------------------DVEAEANA 727

  Fly   925 YFQRIYNHQPNPTLSIDEVLDILQRFKESSNRREQEVFLCMLRNLFEEYRFFCQYPEKELQITAQ 989
            ||.::::..    ||:|.::.:|.|:|||...||:.:|.||:.|||||||||.:|||::|:|.:.
plant   728 YFHQMFSSH----LSVDAMVQMLSRYKESLVPREKLIFECMIANLFEEYRFFPKYPERQLKIASI 788

  Fly   990 LFGGIIDRNLVPTFVALGLSLRCVLDALRKPDGSKLYYFGVTALDRFRTRLHTYNKYCEHIRSIP 1054
            |||.:|...|:.: :.||::||.|||:||||..||::.||..||::|..||....:||.||..|.
plant   789 LFGSVIKHQLISS-LTLGMALRLVLDSLRKPADSKMFLFGSKALEQFVNRLVELPQYCNHILQIS 852

  Fly  1055 HFSDFPPHLIQYVEYGMHG------------QEPPP----------------QKLIGLS------ 1085
            |.....|.|:..:|..:..            ..|.|                |..:.||      
plant   853 HLRSTHPELVTVIEQALSRISSGNLESDASVSHPGPSQSFPGNGELSGSGIGQPALQLSSPLQLQ 917

  Fly  1086 --NTIPSAISSGPGTE-----PIYRNSSMLGNMPAATPGSGPKSNAAV-----SHATRMKSIANA 1138
              |.:||.    |..|     |....:|:..::....||....|:.:.     :.||......:|
plant   918 QKNEVPSV----PSNEAKPLLPSLSTTSVDVSVNPKNPGIPTSSSTSTGFVRPARATTSTRFGSA 978

  Fly  1139 TNIDTLLVA--NQEEKVTVPPEPVQDKTAFIFNNLSQLNIPQKCDEIKEIMTKEYWPWLAQYLVL 1201
            .||:||:.|  .:|..:..||..||||.:||.||:|..||..|..|..||:.::|:||.|||:|:
plant   979 LNIETLVAAAERRENAIEAPPSDVQDKVSFIINNISTTNIESKGKEFAEILPQQYYPWFAQYMVM 1043

  Fly  1202 KRASMEFNFHTLYYNFLDALKNGEINRFVTKETLRNIKVLLRSDKGVINFSDRSLLKNLGHWLGM 1266
            ||||:|.|||.||..|||.:.:..:.:.:.:.|..|.||||.|:....:..:||||||||.|||.
plant  1044 KRASIEPNFHDLYLKFLDKVDSKLLFKEILQNTYENCKVLLGSELIKSSSEERSLLKNLGSWLGR 1108

  Fly  1267 MTLGRNRPILQLDLDLKSLLAEAYHKGQQELLFVVPFVAKILESSAKSRIFRSPNPWTMGIMYVL 1331
            :|:|||..:...::|.|||:.|||.||.  ::.|:||.:|:||....|..::.||||||.|:.:|
plant  1109 LTIGRNYVLRAREIDPKSLIVEAYEKGL--MIAVIPFTSKVLEPCQNSIAYQPPNPWTMAILGLL 1171

  Fly  1332 AELHQEPDLKLNLKFEIEVLCKTLNLELAKLRQVIYLKDPNR--------------THRIEEQMS 1382
            ||::..|:||:||||:||||.|.|.:|:.::.....|||..|              ..:|.:...
plant  1172 AEIYSMPNLKMNLKFDIEVLFKNLGVEMKEVVPTSLLKDRKREIDGNPDFSNKDPGVTQISQPQM 1236

  Fly  1383 QPKPKQLEPVASAPALPREQQSPAQPPPPPQQQQPPQ---QQVPPPP--SSADVDAQNAAAMMM- 1441
            .|:||.:.|:       ::...|......|....|.:   |.|.|..  ::..:|.:..|.:.: 
plant  1237 IPEPKTISPL-------KQIDLPLDVANSPNTDVPSKLLSQYVAPQRVYTNTLMDEEKVATLGLP 1294

  Fly  1442 -----AAGGANSTPGSVSSPNLPTDSSQVALPPPEPRYSYVDVNVSNFQLIGQQL-VLPPNTPFL 1500
                 ..|...|||    ||.........|||           |:.|..:|.|:| ....:.|| 
plant  1295 EQLPSPQGLFQSTP----SPLFSISQLSAALP-----------NIGNHVVINQKLSAFGMHFPF- 1343

  Fly  1501 HANPGIKHMVVNAVERTITDWLQPIVDRSIRIACATTEQIIRKDFALDADENRMRTAAHQMVRNL 1565
                  :.:|..|::|.|.:.:..||.||:.|||.||::::.||:||:.||:|:..|||.||.:|
plant  1344 ------QRVVPLAMDRAIKEIVSGIVQRSVCIACQTTKELVLKDYALEPDESRIYNAAHLMVASL 1402

  Fly  1566 AAGMAMITGKDEIARAISQNLHKALLSGLNGMPSMAEIQAAAMQLASENVELVCAFIQKTSAEKA 1630
            |..:|.:|.|:.:..:||.:|..: |.|||  .|...::.....:.::|::|.||.|::.:.|||
plant  1403 AGSLAHVTCKEPLRTSISGHLRNS-LQGLN--ISNDALEQIVQLVTNDNLDLGCAAIEQAATEKA 1464

  Fly  1631 AAEIDRRLSTDFETRKIARE-EGNRFVDAQILTYQQ-ERLPEAVRIKVGAAPATLYAVYSEFARS 1693
            ...||..::.....|:..|: .|:.|.|..||:... ..:||::|.|.|....:...||.:|.:.
plant  1465 IQTIDADIAQQLLLRRKHRDGAGSSFFDPNILSQNSVSFIPESLRPKPGHLSLSQQRVYEDFVQH 1529

  Fly  1694 IPGFQQ------------MSDRDIAL-------------------------FVPKPTDLSQPNVF 1721
             |..:|            .|..|:||                         .|.:|:|:|.....
plant  1530 -PWQKQSTQTSHGLSAASSSSGDVALGSGYGPVSGKVASEFLSNAGNARMDMVSRPSDISVDGFE 1593

  Fly  1722 ANDDSMVYGEL------------------------------------------ASKMEAFMNTAI 1744
            ::..|::..::                                          |:.||....:.|
plant  1594 SSPVSLLSSQVDPAGDSSSLQFTKSLPTSELNLAESSDAATKETGTSLQTLTSAATMERLGASNI 1658

  Fly  1745 GVPTL---------QIQASKMHML---------LNALIA------TRRLRDQESAFNLLTRAVEG 1785
            ..|:|         ||...||..|         :.|:|:      .|.:...|:||.:..:|.:.
plant  1659 TQPSLSTRDALDKCQIVTQKMEELVANNAGDDEIQAVISEVPEIILRCISRDEAAFAVAQKAFKA 1723

  Fly  1786 LTEGL-VNMH--ENMEQMKMYQNIHLRILGLLNNSFGAPNTERAVTKCFFDIREEVRYNVEAARA 1847
            |.|.. .|:|  .|:..:...:::..|::             :.:|.......|:.:.|.:....
plant  1724 LYENASSNLHVSANLAILVAIRDVCKRVV-------------KELTSWVIYSEEDRKLNKDITIG 1775

  Fly  1848 LITSHFVNLNQFDGMLRDCMDNGNNYVAISFGIALLERLIMDDRVINIVSDNEFMATVELLGRLT 1912
            ||....::|.:::..:...:|.|.|..|..|.|:||:.|:.::.  :::|  |..:.|:.|.:|.
plant  1776 LIQRELLSLAEYNVHMAKHLDGGRNKTATDFAISLLQSLVTEES--SVIS--ELHSLVDALAKLA 1836

  Fly  1913 QHRHRYPECIVNAIDTLWSGNFNSS--SDYSPFN-GNDRYL-------------SGASHYIHSGM 1961
            . :....|.:...||.:.:...|::  ||.|..| .|||..             |.:..|:.|  
plant  1837 S-KSGSSESLQQLIDIIRNPVTNTAGLSDSSTGNDNNDRQKDEKVACNTTNTEESTSLDYVES-- 1898

  Fly  1962 HHVRSCDTDDPPGLQEKTEFLLKDWVALYTQQNQQSTRDARNFGAFVQKMNTYGILKTDDLITRF 2026
                     ||.|.|.:...|.|:|..:........|..::    :|..::..|:||.||....|
plant  1899 ---------DPAGFQNRVSTLFKNWYQICELPGANETACSQ----YVLHLHQTGLLKGDDTTESF 1950

  Fly  2027 FR-----QATHICT--DVVYRMFAEPSLPINQAKNKIFQWIDAFVHLIAMLVRHSGEAGNPTTKI 2084
            ||     ...|..:  |:.......|..|    ::..|..||.:..|:..::::..|. ..::::
plant  1951 FRILLELSVAHCISSEDINSGAVQSPQQP----QSPSFLIIDMYAKLVFSILKYFPEQ-ESSSRL 2010

  Fly  2085 NLLNKVLGIVLGTLIKDHEMRGVSFQQVGYHRFFMMLFMELCTADVILESLMHSIVSAFAYTYHL 2149
            .||::::...:..:.||.|.:..|.....|.|.|:...::||:.|...:.....:::|||..:|.
plant  2011 FLLSEIMADTVRFIQKDAEDKKTSLNSKPYFRLFINWLLDLCSLDPGTDGANFQVLTAFANAFHA 2075

  Fly  2150 LNPSVAPGFCFAWLELISHRVFLGRILVQIPGQKGWPLYAQLLQDLFKYLAPFLRNTELGKPVQL 2214
            |.|...|.|.||||||:|||.|:.::|. :.||||||...:||.||.::|.|||||.|||.||..
plant  2076 LQPLKIPAFSFAWLELVSHRSFMPKLLT-VNGQKGWPYVQRLLVDLLQFLEPFLRNAELGGPVHF 2139

  Fly  2215 LYKGTLRVLLVLLHDFPEFLCDYHFGFCDTIPPNCVQMRNIILSAFPRNMRLPDPFTPNLKVDML 2279
            |||||||||||||||||||||||||.|||.||.:|:||||||||:||||||||||.|||||:|:|
plant  2140 LYKGTLRVLLVLLHDFPEFLCDYHFTFCDVIPSSCIQMRNIILSSFPRNMRLPDPSTPNLKIDLL 2204

  Fly  2280 SDSSNAPKVLSSYIMNIQPANFKKDLDSYLKARAP-VTFLSELRGHLQVT----SEPGTRYNMAL 2339
            .:...||.:||.....::....|.|:|.||.:|.. .||||||:..|.::    |..||||::.|
plant  2205 PEIVEAPCILSEVDAALKAKQMKNDVDEYLTSRQQNSTFLSELKTKLLLSSSEASSAGTRYSVPL 2269

  Fly  2340 MNALVMYVGTQAIALIRNKNFVPNTSNIAHSAHMDIFQNLAVDLDTEGRYLFLNAIANQLRYPNS 2404
            :|:||:|.|.|||..::     ...:...:...:.:|:.|:::|||||||||||||||||||||:
plant  2270 INSLVLYTGMQAIQQLQ-----AGETQAQNVVALQMFKYLSMELDTEGRYLFLNAIANQLRYPNN 2329

  Fly  2405 HTHYFSCAVLHLFAEANSEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPIYKFWDHDFVH 2469
            ||||||..:|:||.|::.|.||||||||||||||||||||||||||||||||||.|.||...|:.
plant  2330 HTHYFSFIMLYLFFESDQEIIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPRYSFWKQAFIR 2394

  Fly  2470 CAPEITKLFESVARSC 2485
            |||||.||||||||||
plant  2395 CAPEIEKLFESVARSC 2410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Not1NP_001286252.1 CNOT1_HEAT 582..737 CDD:293027 36/159 (23%)
CNOT1_TTP_bind 906..1079 CDD:293026 69/200 (35%)
CNOT1_CAF1_bind 1155..1373 CDD:293024 102/217 (47%)
DUF3819 1506..1649 CDD:289602 49/142 (35%)
Not1 2129..2478 CDD:281978 206/353 (58%)
AT1G02080NP_171710.4 CNOT1_HEAT 527..674 CDD:293027 36/159 (23%)
CNOT1_TTP_bind 700..877 CDD:293026 74/313 (24%)
CNOT1_CAF1_bind 995..1218 CDD:293024 103/224 (46%)
DUF3819 1343..1483 CDD:289602 50/149 (34%)
Not1 2048..2403 CDD:281978 208/360 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 418 1.000 Domainoid score I123
eggNOG 1 0.900 - - E1_COG5103
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H9453
Inparanoid 1 1.050 997 1.000 Inparanoid score I44
OMA 1 1.010 - - QHG54022
OrthoDB 1 1.010 - - D42530at2759
OrthoFinder 1 1.000 - - FOG0003737
OrthoInspector 1 1.000 - - oto2953
orthoMCL 1 0.900 - - OOG6_101511
Panther 1 1.100 - - LDO PTHR13162
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2594
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.930

Return to query results.
Submit another query.