DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP1A and Arhgap15

DIOPT Version :9

Sequence 1:NP_001284725.1 Gene:RhoGAP1A / 5740235 FlyBaseID:FBgn0025836 Length:1404 Species:Drosophila melanogaster
Sequence 2:NP_722542.2 Gene:Arhgap15 / 76117 MGIID:1923367 Length:481 Species:Mus musculus


Alignment Length:607 Identity:130/607 - (21%)
Similarity:224/607 - (36%) Gaps:191/607 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   789 KKIVSTIVLNLQTEQSLTLEDLLHKPVARVQINALVFNDLLRETPNAHPDHQPLRQAQKIIQMFL 853
            |:...::..:...:.||.:.:..|:....||:..        :..|:|.|.|...::     |.|
Mouse     3 KRTSCSVQTSTNCDNSLEILNSAHQATGAVQMRI--------KNANSHQDRQSQTKS-----MIL 54

  Fly   854 NQFNVVNQRLPIESN-RNLRRMVRNSFI----------------VELVDGHRKLRHLFLFNDVIA 901
            .....|.:  ||..: ||..:.|....|                .::.||.:|||.         
Mouse    55 TDAGKVTE--PISRHRRNHSQHVLKDVIPPLEHPMVEKEGYLQKAKIADGGKKLRK--------- 108

  Fly   902 CAKYKALGRDRIDYELKWFI-PLKDVSIYEEADPAVELKESSPANISQVKRNLRSVRDQLAMEVA 965
                        ::...|.: ..:.:..|:::      |:.:..|: :.:.|:.|| |.....: 
Mouse   109 ------------NWSTSWIVLSGRKIEFYKDS------KQQALPNM-KTRHNVESV-DLCGAHI- 152

  Fly   966 NSGSGAFRSGDKYRRKLADLESQLVLATPNLVLRLGNKANNKTITFFLSS--DFERTQWIDSILS 1028
                       ::.::.:..:|...:.|.:     ||:       |.|.|  ||....|..:|.:
Mouse   153 -----------EWAKEKSSRKSVFQITTVS-----GNE-------FLLQSDIDFLILDWFQAIKN 194

  Fly  1029 LKQKCNLPGANTINSLEVTAFIVAMQKGMKTEMGSYLMRNTNDESLLVGDLYMGVHGLEGLEQAN 1093
            ...:  ||...:..|||    :..:|:...:|:.|:                             
Mouse   195 AIDR--LPKNPSCGSLE----LFNLQRSSSSELPSH----------------------------- 224

  Fly  1094 DLYICVEVDSYGHYFRKATTKKICRSQTPLWNESFMLELEGSQNVRILLYEAKERPLLKAKHILK 1158
                |       |..||        .|.|...:|||..|..|.:      :..::..:|::  ||
Mouse   225 ----C-------HIDRK--------EQKPEHRKSFMFRLHHSAS------DTSDKNRVKSR--LK 262

  Fly  1159 LSLSWLTETTQPKSIKLTETLELGCSFRFIPGELFRGSTKPGALFGAKMSQVLKREKRDIPFIIG 1223
            ..:|     .:|....|.|                :|..| ..:||:.:..|.:||...:|:.:.
Mouse   263 KFIS-----RRPSLKTLQE----------------KGLIK-DQIFGSHLHTVCEREHSTVPWFVK 305

  Fly  1224 ACIREVERRGMLEVGCYRVSGSASDLAKL--------KKAFESDAYEAEQLLREVDIHSVTGILK 1280
            .||..||:||:...|.|||||:.:.:.||        |...:...:|        |||.|||.||
Mouse   306 QCIEAVEKRGLDVDGIYRVSGNLATIQKLRFIVNQEEKLNLDDSQWE--------DIHVVTGALK 362

  Fly  1281 TFLRELPEALFTDQLYPRFFDTFSAFSNNNESTRINELLKVFEELPQANKASITSILDHLIRVHE 1345
            .|.|||.|.||....:.||.:   |....:.:.:|..:..:.:.||..|..::..:..||.::..
Mouse   363 MFFRELSEPLFPYSFFERFVE---AIKKQDSNEKIETMRSLVKRLPPPNHDTMKILFRHLTKIVA 424

  Fly  1346 KETDNKMSLHNLAMVFGPTLLR 1367
            |.:.|.||..:|.:||||||||
Mouse   425 KASQNLMSTQSLGIVFGPTLLR 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP1ANP_001284725.1 RhoGEF 675..857 CDD:214619 12/67 (18%)
PH_BCR_arthropod 851..1037 CDD:270174 34/205 (17%)
C2 1079..1187 CDD:301316 18/107 (17%)
RhoGAP 1203..1398 CDD:295372 59/173 (34%)
Arhgap15NP_722542.2 PH 88..196 CDD:278594 24/160 (15%)
PH_ARHGAP9-like 89..198 CDD:270053 24/161 (15%)
RhoGAP_ARHGAP27_15_12_9 285..471 CDD:239868 59/173 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1094
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.940

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