DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP1A and arhgap32a

DIOPT Version :9

Sequence 1:NP_001284725.1 Gene:RhoGAP1A / 5740235 FlyBaseID:FBgn0025836 Length:1404 Species:Drosophila melanogaster
Sequence 2:XP_690921.4 Gene:arhgap32a / 562449 ZFINID:ZDB-GENE-060503-918 Length:1676 Species:Danio rerio


Alignment Length:567 Identity:132/567 - (23%)
Similarity:216/567 - (38%) Gaps:171/567 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   863 LPIESNRNLRRMVRNSFIVELVDGHRKL----RHLFLFNDVIACAKYKALGRDRIDYELKWFIPL 923
            ||.||  :||..|..:.:  .|...:||    ||   |..:..||.:.                 
Zfish    69 LPAES--SLRSCVSTASM--KVKNVKKLSLTKRH---FPKLAECAHFH----------------- 109

  Fly   924 KDVSIYEEAD-PAVELKESSPANISQVKRNLRSVRDQLAMEVANSGS--------GAFRSGDK-- 977
                 ||..| .:|:|..:...| ......|.|......:::...|.        ..||..||  
Zfish   110 -----YENVDFGSVQLSLTDEQN-DLTNNGLDSKESVYLIQICCQGRKWTVRRSYEEFRVLDKHL 168

  Fly   978 ----YRRKLADLE---------------SQLVLATPNLVLRLGNKANNK-----TITFFLSSDFE 1018
                |.|:.:.|.               ||::.|   .:.||...|:||     .:|        
Zfish   169 HLCIYDRRFSQLPELPRIDSLKDKTGTLSQMLTA---YISRLSAIADNKINCGPALT-------- 222

  Fly  1019 RTQWIDSILSLKQKCNLPGANTINSLEVTAFIVAMQKGMKTEMGSYLMRNTNDESLLVGDL---- 1079
               |::    :..|.|....|..:|:.|.|  ||....:|    .|:.:..::.|..|||:    
Zfish   223 ---WME----IDNKGNHLLVNDESSINVPA--VAAAHVIK----RYIAQAADELSFEVGDIVSVI 274

  Fly  1080 ----------YMGVHGLE-GLEQANDLYICVEVDSYGHYFRKATTKKICRSQTPLWNESFMLELE 1133
                      :.|.||.: |...:.    |||:.|          :||..:.|            
Zfish   275 DMPPKEDTGWWRGKHGFQVGFFPSE----CVELIS----------EKIPSNVT------------ 313

  Fly  1134 GSQNVRILLYEAKERPLLKAKHILKLSLSWLTETTQPKSIKLTETLELGCSFRFIPGELFRGSTK 1198
                      .:..:|:.| ||...::.......::|...||.:                ||..|
Zfish   314 ----------SSLAKPVSK-KHGKLITFLRTFMKSRPTKQKLKQ----------------RGILK 351

  Fly  1199 PGALFGAKMSQVLKREKRDIPFIIGACIREVERRGMLEVGCYRVSGSASDLAKLKKAFESDAYEA 1263
            . .:||..:.:.|.....|:|.:|.:|...:||.|::: |.||:||.:|::.||:..|:|:  ..
Zfish   352 E-RVFGCDLGEHLLNSGHDVPQVIRSCTEFIERHGVVD-GIYRLSGISSNIQKLRHEFDSE--HV 412

  Fly  1264 EQLLREV---DIHSVTGILKTFLRELPEALFTDQLYPRFFDTFSAFSNNNESTRINELLKVFEEL 1325
            ..|.::.   |||||..:.|.:.||||..|.|.|||.:|.|..||.:::....::::   |.::|
Zfish   413 PDLTKDTYVQDIHSVGSLCKLYFRELPNPLLTYQLYEKFSDAVSAATDDERLVKVHD---VIQQL 474

  Fly  1326 PQANKASITSILDHLIRVHEKETDNKMSLHNLAMVFGPTLLRPGQTQ 1372
            |..:..::..::.||.|:........|...|||:|:.|.|||..|.:
Zfish   475 PPPHYRTLEFLMRHLSRMGTYSNVTNMHCKNLAIVWAPNLLRSKQIE 521

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP1ANP_001284725.1 RhoGEF 675..857 CDD:214619
PH_BCR_arthropod 851..1037 CDD:270174 43/212 (20%)
C2 1079..1187 CDD:301316 18/122 (15%)
RhoGAP 1203..1398 CDD:295372 56/173 (32%)
arhgap32aXP_690921.4 PX_domain 112..226 CDD:295365 24/132 (18%)
SH3_ARHGAP32_33 248..301 CDD:212769 10/60 (17%)
RhoGAP_CdGAP 353..547 CDD:239849 56/175 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2255
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.030

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