DRSC/TRiP Functional Genomics Resources

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Protein Alignment UQCR-11 and AT1G12830

DIOPT Version :9

Sequence 1:NP_001104407.2 Gene:UQCR-11 / 5740185 FlyBaseID:FBgn0260008 Length:85 Species:Drosophila melanogaster
Sequence 2:NP_172743.1 Gene:AT1G12830 / 837839 AraportID:AT1G12830 Length:213 Species:Arabidopsis thaliana


Alignment Length:52 Identity:15/52 - (28%)
Similarity:24/52 - (46%) Gaps:10/52 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 DEEDLVDPQAVLREK----CQAKGHIESLYNKYQECNDRVN---GRSKTTET 60
            |.|:..|....::.|    ||.:   :::.||.|:.|..:|   ..||..||
plant     3 DVENQQDSSFPVKRKSDLFCQDQ---DNVTNKAQKLNPSLNSADSESKDGET 51

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UQCR-11NP_001104407.2 UCR_hinge 22..84 CDD:280480 13/46 (28%)
AT1G12830NP_172743.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR15336
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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