DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG34437 and snk

DIOPT Version :9

Sequence 1:	NP_001097955.1	Gene:	CG34437 / 5740179	FlyBaseID:	FBgn0085466	Length:	266	Species:	Drosophila melanogaster
Sequence 2:	NP_001097766.1	Gene:	snk / 41607	FlyBaseID:	FBgn0003450	Length:	435	Species:	Drosophila melanogaster

Alignment Length:	215	Identity:	59/215 - (27%)
Similarity:	94/215 - (43%)	Gaps:	32/215 - (14%)

- Green bases have known domain annotations that are detailed below.

  Fly    53 CSGTLINKQYVITTASCVFDQSE--STVFLG-RFDNIPQNRNRYVKHSVQSVYTHKLYNKQTFEH 114
            |.|.|:::.||:|.|.|....|:  ..|.|| |..|......:.:|  :..:..|..|....:.|
  Fly   220 CGGALVSELYVLTAAHCATSGSKPPDMVRLGARQLNETSATQQDIK--ILIIVLHPKYRSSAYYH 282

  Fly   115 DIALLLLDDPVTFKMSIQPICIWLGEITNLNHLESNRWGLSEKM-----IFQRIN-------TVK 167
            |||||.|...|.|...::|.|:|......:..:.:..||.:|.:     ..::::       |.|
  Fly   283 DIALLKLTRRVKFSEQVRPACLWQLPELQIPTVVAAGWGRTEFLGAKSNALRQVDLDVVPQMTCK 347

  Fly   168 ILKIKKCRDSFGITLKKSQICAGFQNGNICTETGSSLVKQIHYSGKLWNT---LIGIQSYGVSER 229
            .:..|:.|...||.  :.|.|||:..|...|..|.| ...||.....:|.   ::||.|:|  :.
  Fly   348 QIYRKERRLPRGII--EGQFCAGYLPGGRDTCQGDS-GGPIHALLPEYNCVAFVVGITSFG--KF 407

  Fly   230 C-------IYNKIAHYIDWI 242
            |       :|.::..|:|||
  Fly   408 CAAPNAPGVYTRLYSYLDWI 427

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG34437	NP_001097955.1	Tryp_SPc	39..242	CDD:214473	57/213 (27%)
CG34437	NP_001097955.1	Tryp_SPc	39..242	CDD:304450	57/213 (27%)
snk	NP_001097766.1	CLIP	93..139	CDD:197829
		Tryp_SPc	186..430	CDD:238113	59/215 (27%)
		Tryp_SPc	186..427	CDD:214473	57/213 (27%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.910