DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34437 and Tmprss6

DIOPT Version :9

Sequence 1:NP_001097955.1 Gene:CG34437 / 5740179 FlyBaseID:FBgn0085466 Length:266 Species:Drosophila melanogaster
Sequence 2:XP_006242057.1 Gene:Tmprss6 / 315388 RGDID:1307138 Length:811 Species:Rattus norvegicus


Alignment Length:245 Identity:59/245 - (24%)
Similarity:113/245 - (46%) Gaps:58/245 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 ETPWMAFIASPTKN-CSGTLINKQYVITTASCVFDQSES-----TVFLGRFDNIPQNRNRY---V 94
            |.||.|.:....:: |.|.||..::|||.|.|..:.|.:     |||||:.    :..:|:   |
  Rat   587 EWPWQASLQIRGRHICGGALIADRWVITAAHCFQEDSMASPRLWTVFLGKM----RQNSRWPGEV 647

  Fly    95 KHSVQSVYTHKLYNKQTFEHDIALLLLDDPVTFKMSIQPICI-------------WLGEITNLNH 146
            ...|..::.|..:.:.:.::|:|||.||.||.:..:::|:|:             |:        
  Rat   648 SFKVSRLFLHPYHEEDSHDYDVALLQLDHPVVYSATVRPVCLPARSHFFEPGQHCWI-------- 704

  Fly   147 LESNRWGLSEK-----MIFQRINTVKILKIKKCRDSFGITLKKSQICAGFQNG--NICT-ETGSS 203
               ..||...:     ...|::: |:::....|.:::...:....:|||::.|  :.|. ::|..
  Rat   705 ---TGWGAQREGGPGSSTLQKVD-VQLIPQDLCNEAYRYQVTPRMLCAGYRKGKKDACQGDSGGP 765

  Fly   204 LVKQIHYSGKLWNTLIGIQSYGVSERC-------IYNKIAHYIDWIVGVV 246
            ||.: ..||: | .|.|:.|:|:.  |       :|.::...::||..|:
  Rat   766 LVCK-EPSGR-W-FLAGLVSWGLG--CGRPNFFGVYTRVTRVVNWIQQVL 810

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34437NP_001097955.1 Tryp_SPc 39..242 CDD:214473 56/239 (23%)
Tryp_SPc 39..242 CDD:304450 56/239 (23%)
Tmprss6XP_006242057.1 SEA 88..185 CDD:279699
LDLa 459..489 CDD:238060
LDLa 495..525 CDD:238060
Ldl_recept_a 529..566 CDD:278486
Tryp_SPc 576..806 CDD:214473 56/239 (23%)
Tryp_SPc 577..809 CDD:238113 58/242 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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